Literature DB >> 9990128

Structure analysis of a collagen-model peptide with a (Pro-Hyp-Gly) sequence repeat.

V Nagarajan1, S Kamitori, K Okuyama.   

Abstract

The crystal structure of a triple helical peptide (Pro-Hyp-Gly)10 has been determined at 1.9 A resolution. Single crystals grown by the hanging drop method, diffracted to a resolution of 1.8 A. The polymer-like structure of the triple helical repeat Pro-Hyp-Gly was in accordance with the 7/2 model proposed for collagen and very similar to the previously determined structure with a Pro-Pro-Gly sequence repeat. The solvent structure was also very similar to that previously observed, showing similar hydration patterns, but different crystal packing. The presence of hydroxyproline did not have any effect on the molecular structure or the hydration structure. This is in accordance with the recent finding that the inductive effect of the hydroxyl group attached to the Cgamma atom of hydroxyproline enhances collagen stability rather than the extensive water network.

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Year:  1999        PMID: 9990128     DOI: 10.1093/oxfordjournals.jbchem.a022288

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  11 in total

1.  A statistically derived parameterization for the collagen triple-helix.

Authors:  Jan K Rainey; M Cynthia Goh
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2.  FTIR studies of collagen model peptides: complementary experimental and simulation approaches to conformation and unfolding.

Authors:  Michael A Bryan; Joseph W Brauner; Gloria Anderle; Carol R Flach; Barbara Brodsky; Richard Mendelsohn
Journal:  J Am Chem Soc       Date:  2007-06-06       Impact factor: 15.419

3.  Stabilization of collagen-model, triple-helical peptides for in vitro and in vivo applications.

Authors:  Manishabrata Bhowmick; Gregg B Fields
Journal:  Methods Mol Biol       Date:  2013

4.  Solution structure of an ABC collagen heterotrimer reveals a single-register helix stabilized by electrostatic interactions.

Authors:  Jorge A Fallas; Varun Gauba; Jeffrey D Hartgerink
Journal:  J Biol Chem       Date:  2009-07-22       Impact factor: 5.157

5.  A peptide study of the relationship between the collagen triple-helix and amyloid.

Authors:  Avanish S Parmar; Ana Monica Nunes; Jean Baum; Barbara Brodsky
Journal:  Biopolymers       Date:  2012-10       Impact factor: 2.505

6.  Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3).

Authors:  Rita Berisio; Luigi Vitagliano; Lelio Mazzarella; Adriana Zagari
Journal:  Protein Sci       Date:  2002-02       Impact factor: 6.725

Review 7.  Prolyl 4-hydroxylase.

Authors:  Kelly L Gorres; Ronald T Raines
Journal:  Crit Rev Biochem Mol Biol       Date:  2010-04       Impact factor: 8.250

8.  Sequence dependence of kinetics and morphology of collagen model peptide self-assembly into higher order structures.

Authors:  Karunakar Kar; Yuh-Hwa Wang; Barbara Brodsky
Journal:  Protein Sci       Date:  2008-04-25       Impact factor: 6.725

9.  Photothermal-modulated drug delivery and magnetic relaxation based on collagen/poly(γ-glutamic acid) hydrogel.

Authors:  Sun-Hee Cho; Ahreum Kim; Woojung Shin; Min Beom Heo; Hyun Jong Noh; Kwan Soo Hong; Jee-Hyun Cho; Yong Taik Lim
Journal:  Int J Nanomedicine       Date:  2017-03-31

Review 10.  Revealing Accessibility of Cryptic Protein Binding Sites within the Functional Collagen Fibril.

Authors:  Cody L Hoop; Jie Zhu; Ana Monica Nunes; David A Case; Jean Baum
Journal:  Biomolecules       Date:  2017-11-01
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