Literature DB >> 20199358

Prolyl 4-hydroxylase.

Kelly L Gorres1, Ronald T Raines.   

Abstract

Posttranslational modifications can cause profound changes in protein function. Typically, these modifications are reversible, and thus provide a biochemical on-off switch. In contrast, proline residues are the substrates for an irreversible reaction that is the most common posttranslational modification in humans. This reaction, which is catalyzed by prolyl 4-hydroxylase (P4H), yields (2S,4R)-4-hydroxyproline (Hyp). The protein substrates for P4Hs are diverse. Likewise, the biological consequences of prolyl hydroxylation vary widely, and include altering protein conformation and protein-protein interactions, and enabling further modification. The best known role for Hyp is in stabilizing the collagen triple helix. Hyp is also found in proteins with collagen-like domains, as well as elastin, conotoxins, and argonaute 2. A prolyl hydroxylase domain protein acts on the hypoxia inducible factor alpha, which plays a key role in sensing molecular oxygen, and could act on inhibitory kappaB kinase and RNA polymerase II. P4Hs are not unique to animals, being found in plants and microbes as well. Here, we review the enzymic catalysts of prolyl hydroxylation, along with the chemical and biochemical consequences of this subtle but abundant posttranslational modification.

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Year:  2010        PMID: 20199358      PMCID: PMC2841224          DOI: 10.3109/10409231003627991

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  178 in total

Review 1.  Synthetic genes for the elucidation of glycosylation codes for arabinogalactan-proteins and other hydroxyproline-rich glycoproteins.

Authors:  M J Kieliszewski; E Shpak
Journal:  Cell Mol Life Sci       Date:  2001-09       Impact factor: 9.261

Review 2.  Collectins: players of the innate immune system.

Authors:  J Koenraad van de Wetering; Lambert M G van Golde; Joseph J Batenburg
Journal:  Eur J Biochem       Date:  2004-04

3.  Stereoelectronic effects on polyproline conformation.

Authors:  Jia-Cherng Horng; Ronald T Raines
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

4.  Production of human prolyl 4-hydroxylase in Escherichia coli.

Authors:  Elizabeth A Kersteen; Joshua J Higgin; Ronald T Raines
Journal:  Protein Expr Purif       Date:  2004-12       Impact factor: 1.650

5.  Collagen stability: insights from NMR spectroscopic and hybrid density functional computational investigations of the effect of electronegative substituents on prolyl ring conformations.

Authors:  Michele L DeRider; Steven J Wilkens; Michael J Waddell; Lynn E Bretscher; Frank Weinhold; Ronald T Raines; John L Markley
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

6.  von Hippel-Lindau protein binds hyperphosphorylated large subunit of RNA polymerase II through a proline hydroxylation motif and targets it for ubiquitination.

Authors:  Anna V Kuznetsova; Jaroslaw Meller; Phillip O Schnell; James A Nash; Monika L Ignacak; Yolanda Sanchez; Joan W Conaway; Ronald C Conaway; Maria F Czyzyk-Krzeska
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

Review 7.  Gly-X-Y tripeptide frequencies in collagen: a context for host-guest triple-helical peptides.

Authors:  J A Ramshaw; N K Shah; B Brodsky
Journal:  J Struct Biol       Date:  1998       Impact factor: 2.867

8.  Crystal structure of prolyl 4-hydroxylase from Bacillus anthracis.

Authors:  Megen A Culpepper; Emily E Scott; Julian Limburg
Journal:  Biochemistry       Date:  2010-01-12       Impact factor: 3.162

9.  An endoplasmic reticulum transmembrane prolyl 4-hydroxylase is induced by hypoxia and acts on hypoxia-inducible factor alpha.

Authors:  Peppi Koivunen; Päivi Tiainen; Jaana Hyvärinen; Kim E Williams; Raija Sormunen; Stephen J Klaus; Kari I Kivirikko; Johanna Myllyharju
Journal:  J Biol Chem       Date:  2007-08-27       Impact factor: 5.157

10.  Stringency of the 2-His-1-Asp active-site motif in prolyl 4-hydroxylase.

Authors:  Kelly L Gorres; Khian Hong Pua; Ronald T Raines
Journal:  PLoS One       Date:  2009-11-05       Impact factor: 3.240

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  191 in total

1.  The Skp1 protein from Toxoplasma is modified by a cytoplasmic prolyl 4-hydroxylase associated with oxygen sensing in the social amoeba Dictyostelium.

Authors:  Yuechi Xu; Kevin M Brown; Zhuo A Wang; Hanke van der Wel; Crystal Teygong; Dongmei Zhang; Ira J Blader; Christopher M West
Journal:  J Biol Chem       Date:  2012-05-30       Impact factor: 5.157

2.  Label-Free Interactome Analysis Revealed an Essential Role of CUL3-KEAP1 Complex in Mediating the Ubiquitination and Degradation of PHD2.

Authors:  Ang Luo; Yue Chen
Journal:  J Proteome Res       Date:  2019-12-06       Impact factor: 4.466

3.  Ascorbate-induced generation of 5-hydroxymethylcytosine is unaffected by varying levels of iron and 2-oxoglutarate.

Authors:  Kevin M Dickson; Christopher B Gustafson; Juan I Young; Stephan Züchner; Gaofeng Wang
Journal:  Biochem Biophys Res Commun       Date:  2013-09-08       Impact factor: 3.575

Review 4.  Chaperoning osteogenesis: new protein-folding disease paradigms.

Authors:  Elena Makareeva; Nydea A Aviles; Sergey Leikin
Journal:  Trends Cell Biol       Date:  2010-12-21       Impact factor: 20.808

5.  Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.

Authors:  Luke Erber; Ang Luo; Yue Chen
Journal:  Mol Cell Proteomics       Date:  2019-06-25       Impact factor: 5.911

6.  Mutations in PPIB (cyclophilin B) delay type I procollagen chain association and result in perinatal lethal to moderate osteogenesis imperfecta phenotypes.

Authors:  Shawna M Pyott; Ulrike Schwarze; Helena E Christiansen; Melanie G Pepin; Dru F Leistritz; Richard Dineen; Catharine Harris; Barbara K Burton; Brad Angle; Katherine Kim; Michael D Sussman; Maryann Weis; David R Eyre; David W Russell; Kevin J McCarthy; Robert D Steiner; Peter H Byers
Journal:  Hum Mol Genet       Date:  2011-01-31       Impact factor: 6.150

Review 7.  Vitamin C in Stem Cell Reprogramming and Cancer.

Authors:  Luisa Cimmino; Benjamin G Neel; Iannis Aifantis
Journal:  Trends Cell Biol       Date:  2018-04-30       Impact factor: 20.808

8.  Enhanced In Vivo Bone and Blood Vessel Formation by Iron Oxide and Silica Doped 3D Printed Tricalcium Phosphate Scaffolds.

Authors:  Susmita Bose; Dishary Banerjee; Samuel Robertson; Sahar Vahabzadeh
Journal:  Ann Biomed Eng       Date:  2018-05-04       Impact factor: 3.934

9.  An additional function of the rough endoplasmic reticulum protein complex prolyl 3-hydroxylase 1·cartilage-associated protein·cyclophilin B: the CXXXC motif reveals disulfide isomerase activity in vitro.

Authors:  Yoshihiro Ishikawa; Hans Peter Bächinger
Journal:  J Biol Chem       Date:  2013-09-16       Impact factor: 5.157

Review 10.  Collagen Prolyl Hydroxylases Are Bifunctional Growth Regulators in Melanoma.

Authors:  Aithne Atkinson; Alexander Renziehausen; Hexiao Wang; Cristiana Lo Nigro; Laura Lattanzio; Marco Merlano; Bhavya Rao; Lynda Weir; Alan Evans; Rubeta Matin; Catherine Harwood; Peter Szlosarek; J Geoffrey Pickering; Colin Fleming; Van Ren Sim; Su Li; James T Vasta; Ronald T Raines; Mathieu Boniol; Alastair Thompson; Charlotte Proby; Tim Crook; Nelofer Syed
Journal:  J Invest Dermatol       Date:  2018-11-16       Impact factor: 8.551

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