Literature DB >> 9860963

High-resolution NMR of encapsulated proteins dissolved in low-viscosity fluids.

A J Wand1, M R Ehrhardt, P F Flynn.   

Abstract

The majority of known proteins are too large to be comprehensively examined by solution NMR methods, primarily because they tumble too slowly in solution. Here we introduce an approach to making the NMR relaxation properties of large proteins amenable to modern solution NMR techniques. The encapsulation of a protein in a reverse micelle dissolved in a low-viscosity fluid allows it to tumble as fast as a much smaller protein. The approach is demonstrated and validated with the protein ubiquitin encapsulated in reverse micelles prepared in a variety of alkane solvents.

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Year:  1998        PMID: 9860963      PMCID: PMC28037          DOI: 10.1073/pnas.95.26.15299

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

1.  Protein extraction using reverse micelles.

Authors:  K E Cöklen; T A Hatton
Journal:  Biotechnol Prog       Date:  1985-03

2.  Two-dimensional 1H NMR study of human ubiquitin: a main chain directed assignment and structure analysis.

Authors:  D L Di Stefano; A J Wand
Journal:  Biochemistry       Date:  1987-11-17       Impact factor: 3.162

Review 3.  An account of NMR in structural biology.

Authors:  G Wagner
Journal:  Nat Struct Biol       Date:  1997-10

4.  Direct measurement of angles between bond vectors in high-resolution NMR.

Authors:  B Reif; M Hennig; C Griesinger
Journal:  Science       Date:  1997-05-23       Impact factor: 47.728

Review 5.  Reverse micelles as hosts for proteins and small molecules.

Authors:  P L Luisi; M Giomini; M P Pileni; B H Robinson
Journal:  Biochim Biophys Acta       Date:  1988-02-24

6.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

7.  Backbone 1H and 15N resonance assignments of the N-terminal SH3 domain of drk in folded and unfolded states using enhanced-sensitivity pulsed field gradient NMR techniques.

Authors:  O Zhang; L E Kay; J P Olivier; J D Forman-Kay
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

8.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

9.  Fast internal main-chain dynamics of human ubiquitin.

Authors:  D M Schneider; M J Dellwo; A J Wand
Journal:  Biochemistry       Date:  1992-04-14       Impact factor: 3.162

10.  Internal dynamics of human ubiquitin revealed by 13C-relaxation studies of randomly fractionally labeled protein.

Authors:  A J Wand; J L Urbauer; R P McEvoy; R J Bieber
Journal:  Biochemistry       Date:  1996-05-14       Impact factor: 3.162

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  35 in total

1.  Phosphorylation-dependent changes in structure and dynamics in ERK2 detected by SDSL and EPR.

Authors:  Andrew N Hoofnagle; James W Stoner; Thomas Lee; Sandra S Eaton; Natalie G Ahn
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

2.  A simple and effective NMR cell for studies of encapsulated proteins dissolved in low viscosity solvents.

Authors:  Peter F Flynn; Mark J Milton; Charles R Babu; A Joshua Wand
Journal:  J Biomol NMR       Date:  2002-08       Impact factor: 2.835

3.  Preparation, characterization, and NMR spectroscopy of encapsulated proteins dissolved in low viscosity fluids.

Authors:  Charles R Babu; Peter F Flynn; A Joshua Wand
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

4.  Role for NMR in structural genomics.

Authors:  Michael A Kennedy; Gaetano T Montelione; Cheryl H Arrowsmith; John L Markley
Journal:  J Struct Funct Genomics       Date:  2002

5.  Recent Advances in the Application of Solution NMR Spectroscopy to Multi-Span Integral Membrane Proteins.

Authors:  Hak Jun Kim; Stanley C Howell; Wade D Van Horn; Young Ho Jeon; Charles R Sanders
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2009-11-01       Impact factor: 9.795

6.  Novel surfactant mixtures for NMR spectroscopy of encapsulated proteins dissolved in low-viscosity fluids.

Authors:  Ronald W Peterson; Maxim S Pometun; Zhengshuang Shi; A Joshua Wand
Journal:  Protein Sci       Date:  2005-09-30       Impact factor: 6.725

7.  High-resolution NMR studies of encapsulated proteins in liquid ethane.

Authors:  Ronald W Peterson; Brian G Lefebvre; A Joshua Wand
Journal:  J Am Chem Soc       Date:  2005-07-27       Impact factor: 15.419

8.  Self contained high pressure cell, apparatus and procedure for the preparation of encapsulated proteins dissolved in low viscosity fluids for NMR spectroscopy.

Authors:  Ronald W Peterson; A Joshua Wand
Journal:  Rev Sci Instrum       Date:  2005-09       Impact factor: 1.523

9.  Cold denaturation of encapsulated ubiquitin.

Authors:  Maxim S Pometun; Ronald W Peterson; Charles R Babu; A Joshua Wand
Journal:  J Am Chem Soc       Date:  2006-08-23       Impact factor: 15.419

10.  15N relaxation study of the cold shock protein CspB at various solvent viscosities.

Authors:  Markus Zeeb; Maik H Jacob; Thomas Schindler; Jochen Balbach
Journal:  J Biomol NMR       Date:  2003-11       Impact factor: 2.835

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