Literature DB >> 9847178

The RNA Modification Database: 1999 update.

J Rozenski1, P F Crain, J A McCloskey.   

Abstract

The RNA Modification Database (http://medlib.med.utah.edu/RNAmods/) provides a comprehensive listing of naturally modified nucleosides in RNA. Each file includes: chemical structure; common name and symbol; type(s) of RNA in which found and corresponding phylogenetic distribution; Chemical s registry number and index name; and initial literature citations for structure characterization and chemical synthesis. New features include capability to search database files by name or substructural features, modifications in tmRNA, and links to related data and sites.

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Year:  1999        PMID: 9847178      PMCID: PMC148133          DOI: 10.1093/nar/27.1.196

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  173 in total

1.  Detection and selective dissociation of intact ribosomes in a mass spectrometer.

Authors:  A A Rostom; P Fucini; D R Benjamin; R Juenemann; K H Nierhaus; F U Hartl; C M Dobson; C V Robinson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

2.  A primordial tRNA modification required for the evolution of life?

Authors:  G R Björk; K Jacobsson; K Nilsson; M J Johansson; A S Byström; O P Persson
Journal:  EMBO J       Date:  2001-01-15       Impact factor: 11.598

3.  Posttranscriptional modifications in the A-loop of 23S rRNAs from selected archaea and eubacteria.

Authors:  M A Hansen; F Kirpekar; W Ritterbusch; B Vester
Journal:  RNA       Date:  2002-02       Impact factor: 4.942

4.  Chemical incorporation of 1-methyladenosine into oligonucleotides.

Authors:  Sergey N Mikhailov; Jef Rozenski; Ekaterina V Efimtseva; Roger Busson; Arthur Van Aerschot; Piet Herdewijn
Journal:  Nucleic Acids Res       Date:  2002-03-01       Impact factor: 16.971

5.  Effects of anticodon 2'-O-methylations on tRNA codon recognition in an Escherichia coli cell-free translation.

Authors:  A Satoh; K Takai; R Ouchi; S Yokoyama; H Takaku
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

6.  Detection of pseudouridine and other modifications in tRNA by cyanoethylation and MALDI mass spectrometry.

Authors:  Jonas Mengel-Jørgensen; Finn Kirpekar
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

7.  Transfer RNA modifications that alter +1 frameshifting in general fail to affect -1 frameshifting.

Authors:  Jaunius Urbonavicius; Guillaume Stahl; Jérôme M B Durand; Samia N Ben Salem; Qiang Qian; Philip J Farabaugh; Glenn R Björk
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

8.  Substrate binding analysis of the 23S rRNA methyltransferase RrmJ.

Authors:  Jutta Hager; Bart L Staker; Ursula Jakob
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

9.  Crystal structure of RlmAI: implications for understanding the 23S rRNA G745/G748-methylation at the macrolide antibiotic-binding site.

Authors:  Kalyan Das; Thomas Acton; Yiwen Chiang; Lydia Shih; Eddy Arnold; Gaetano T Montelione
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-03       Impact factor: 11.205

10.  The tRNA recognition mechanism of folate/FAD-dependent tRNA methyltransferase (TrmFO).

Authors:  Ryota Yamagami; Koki Yamashita; Hiroshi Nishimasu; Chie Tomikawa; Anna Ochi; Chikako Iwashita; Akira Hirata; Ryuichiro Ishitani; Osamu Nureki; Hiroyuki Hori
Journal:  J Biol Chem       Date:  2012-10-24       Impact factor: 5.157

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