Literature DB >> 9806458

DNA extraction and stability for epidemiological studies.

S Visvikis1, A Schlenck, M Maurice.   

Abstract

During the last few years, an important development of molecular biology techniques has been observed in research and clinical laboratories, and consequently the availability of DNA is becoming essential for epidemiological studies. Several DNA extraction procedures have been proposed. However as the quantity and quality of the DNA extracted is very variable, standardization of the storage of samples, and of extraction procedures becomes essential. Three steps will be considered. (i) Procedures of whole blood preservation prior to extraction which seem to affect yield and purity of the DNA extracted; (ii) DNA extraction procedures, which must be validated by a systematic DNA quality control using DNA molecular weight screening and spectrophotometric analysis, and also by verification that the DNA obtained is well adapted for molecular biology applications; (iii) the third important factor to study is the storage of DNA, since data on short-term (several months) and especially on long-term (several years) DNA stability is often missing and/or conflicting. Detailed studies must be done in order to establish guidelines for proper handling of genetic material.

Mesh:

Substances:

Year:  1998        PMID: 9806458     DOI: 10.1515/CCLM.1998.094

Source DB:  PubMed          Journal:  Clin Chem Lab Med        ISSN: 1434-6621            Impact factor:   3.694


  15 in total

Review 1.  Sample pretreatment and nucleic acid-based detection for fast diagnosis utilizing microfluidic systems.

Authors:  Jung-Hao Wang; Chih-Hung Wang; Gwo-Bin Lee
Journal:  Ann Biomed Eng       Date:  2011-12-07       Impact factor: 3.934

2.  Biospecimen reporting for improved study quality (BRISQ).

Authors:  Helen M Moore; Andrea B Kelly; Scott D Jewell; Lisa M McShane; Douglas P Clark; Renata Greenspan; Daniel F Hayes; Pierre Hainaut; Paula Kim; Elizabeth Mansfield; Olga Potapova; Peter Riegman; Yaffa Rubinstein; Edward Seijo; Stella Somiari; Peter Watson; Heinz-Ulrich Weier; Claire Zhu; Jim Vaught
Journal:  J Proteome Res       Date:  2011-06-21       Impact factor: 4.466

3.  Development of defined microbial population standards using fluorescence activated cell sorting for the absolute quantification of S. aureus using real-time PCR.

Authors:  Alice Martinon; Ultan P Cronin; Martin G Wilkinson
Journal:  Mol Biotechnol       Date:  2012-01       Impact factor: 2.695

4.  Biospecimen Reporting for Improved Study Quality.

Authors:  Helen M Moore; Andrea Kelly; Scott D Jewell; Lisa M McShane; Douglas P Clark; Renata Greenspan; Pierre Hainaut; Daniel F Hayes; Paula Kim; Elizabeth Mansfield; Olga Potapova; Peter Riegman; Yaffa Rubinstein; Edward Seijo; Stella Somiari; Peter Watson; Heinz-Ulrich Weier; Claire Zhu; Jim Vaught
Journal:  Biopreserv Biobank       Date:  2011-04       Impact factor: 2.300

5.  Exome sequencing of family trios from the National Birth Defects Prevention Study: Tapping into a rich resource of genetic and environmental data.

Authors:  Mary M Jenkins; Lynn M Almli; Faith Pangilinan; Jessica X Chong; Elizabeth E Blue; Stuart K Shapira; Janson White; Daniel McGoldrick; Joshua D Smith; James C Mullikin; Christopher J Bean; Wendy N Nembhard; Xiang-Yang Lou; Gary M Shaw; Paul A Romitti; Kim Keppler-Noreuil; Mahsa M Yazdy; Denise M Kay; Tonia C Carter; Andrew F Olshan; Kristin J Moore; Nanette Nascone-Yoder; Richard H Finnell; Philip J Lupo; Marcia L Feldkamp; Deborah A Nickerson; Michael J Bamshad; Lawrence C Brody; Jennita Reefhuis
Journal:  Birth Defects Res       Date:  2019-07-21       Impact factor: 2.344

6.  Evaluation of the long-term storage stability of saliva as a source of human DNA.

Authors:  Robert P Anthonappa; Nigel M King; A Bakr M Rabie
Journal:  Clin Oral Investig       Date:  2012-10-27       Impact factor: 3.573

7.  Buffy coat specimens remain viable as a DNA source for highly multiplexed genome-wide genetic tests after long term storage.

Authors:  Josyf C Mychaleckyj; Emily A Farber; Jessica Chmielewski; Jamie Artale; Laney S Light; Donald W Bowden; Xuanlin Hou; Santica M Marcovina
Journal:  J Transl Med       Date:  2011-06-10       Impact factor: 5.531

8.  Sources of pre-analytical variations in yield of DNA extracted from blood samples: analysis of 50,000 DNA samples in EPIC.

Authors:  Elodie Caboux; Christophe Lallemand; Gilles Ferro; Bertrand Hémon; Maimuna Mendy; Carine Biessy; Matt Sims; Nick Wareham; Abigail Britten; Anne Boland; Amy Hutchinson; Afshan Siddiq; Paolo Vineis; Elio Riboli; Isabelle Romieu; Sabina Rinaldi; Marc J Gunter; Petra H M Peeters; Yvonne T van der Schouw; Ruth Travis; H Bas Bueno-de-Mesquita; Federico Canzian; Maria-José Sánchez; Guri Skeie; Karina Standahl Olsen; Eiliv Lund; Roberto Bilbao; Núria Sala; Aurelio Barricarte; Domenico Palli; Carmen Navarro; Salvatore Panico; Maria Luisa Redondo; Silvia Polidoro; Laure Dossus; Marie Christine Boutron-Ruault; Françoise Clavel-Chapelon; Antonia Trichopoulou; Dimitrios Trichopoulos; Pagona Lagiou; Heiner Boeing; Eva Fisher; Rosario Tumino; Claudia Agnoli; Pierre Hainaut
Journal:  PLoS One       Date:  2012-07-13       Impact factor: 3.240

9.  Jumping on the Train of Personalized Medicine: A Primer for Non-Geneticist Clinicians: Part 2. Fundamental Concepts in Genetic Epidemiology.

Authors:  Aihua Li; David Meyre
Journal:  Curr Psychiatry Rev       Date:  2014-05

10.  Blood and dried blood spot telomere length measurement by qPCR: assay considerations.

Authors:  DeAnna L Zanet; Sara Saberi; Laura Oliveira; Beheroze Sattha; Izabella Gadawski; Hélène C F Côté
Journal:  PLoS One       Date:  2013-02-25       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.