Literature DB >> 21826252

Biospecimen Reporting for Improved Study Quality.

Helen M Moore, Andrea Kelly, Scott D Jewell, Lisa M McShane, Douglas P Clark, Renata Greenspan, Pierre Hainaut, Daniel F Hayes, Paula Kim, Elizabeth Mansfield, Olga Potapova, Peter Riegman, Yaffa Rubinstein, Edward Seijo, Stella Somiari, Peter Watson, Heinz-Ulrich Weier, Claire Zhu, Jim Vaught.   

Abstract

Human biospecimens are subject to a number of different collection, processing, and storage factors that can significantly alter their molecular composition and consistency. These biospecimen preanalytical factors, in turn, influence experimental outcomes and the ability to reproduce scientific results. Currently, the extent and type of information specific to the biospecimen preanalytical conditions reported in scientific publications and regulatory submissions varies widely. To improve the quality of research utilizing human tissues, it is critical that information regarding the handling of biospecimens be reported in a thorough, accurate, and standardized manner. The Biospecimen Reporting for Improved Study Quality recommendations outlined herein are intended to apply to any study in which human biospecimens are used. The purpose of reporting these details is to supply others, from researchers to regulators, with more consistent and standardized information to better evaluate, interpret, compare, and reproduce the experimental results. The Biospecimen Reporting for Improved Study Quality guidelines are proposed as an important and timely resource tool to strengthen communication and publications around biospecimen-related research and help reassure patient contributors and the advocacy community that the contributions are valued and respected.

Entities:  

Year:  2011        PMID: 21826252      PMCID: PMC3142856          DOI: 10.1089/bio.2010.0036

Source DB:  PubMed          Journal:  Biopreserv Biobank        ISSN: 1947-5543            Impact factor:   2.300


  81 in total

1.  Plastic versus glass tubes: effects on analytical performance of selected serum and plasma hormone assays.

Authors:  Carol M Preissner; William M Reilly; Richard C Cyr; Dennis J O'Kane; Ravinder J Singh; Stefan K G Grebe
Journal:  Clin Chem       Date:  2004-07       Impact factor: 8.327

2.  Impact of pre-analytical handling on bone marrow mRNA gene expression.

Authors:  Stephen Breit; Matthias Nees; Ulrike Schaefer; Margit Pfoersich; Christian Hagemeier; Martina Muckenthaler; Andreas E Kulozik
Journal:  Br J Haematol       Date:  2004-07       Impact factor: 6.998

3.  Analytical and preanalytical biases in serum proteomic pattern analysis for breast cancer diagnosis.

Authors:  Aly Karsan; Bernhard J Eigl; Stephane Flibotte; Karen Gelmon; Philip Switzer; Patricia Hassell; Dorothy Harrison; Jennifer Law; Malcolm Hayes; Moira Stillwell; Zhen Xiao; Thomas P Conrads; Timothy Veenstra
Journal:  Clin Chem       Date:  2005-06-10       Impact factor: 8.327

4.  Successful application of microarray technology to microdissected formalin-fixed, paraffin-embedded tissue.

Authors:  Renata A Coudry; Sibele I Meireles; Radka Stoyanova; Harry S Cooper; Alan Carpino; Xianqun Wang; Paul F Engstrom; Margie L Clapper
Journal:  J Mol Diagn       Date:  2007-02       Impact factor: 5.568

5.  Proteomic analysis and comparison of the biopsy and autopsy specimen of human brain temporal lobe.

Authors:  Sizhi He; Qingsong Wang; Jintang He; Hai Pu; Wei Yang; Jianguo Ji
Journal:  Proteomics       Date:  2006-09       Impact factor: 3.984

Review 6.  A genetic explanation of Slaughter's concept of field cancerization: evidence and clinical implications.

Authors:  Boudewijn J M Braakhuis; Maarten P Tabor; J Alain Kummer; C René Leemans; Ruud H Brakenhoff
Journal:  Cancer Res       Date:  2003-04-15       Impact factor: 12.701

7.  Effects of specimen collection, processing, and storage conditions on stability of human immunodeficiency virus type 1 RNA levels in plasma.

Authors:  C C Ginocchio; X P Wang; M H Kaplan; G Mulligan; D Witt; J W Romano; M Cronin; R Carroll
Journal:  J Clin Microbiol       Date:  1997-11       Impact factor: 5.948

8.  Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffin-embedded, and unfixed frozen tissue samples.

Authors:  Marshall S Scicchitano; Deidre A Dalmas; Melissa A Bertiaux; Shawn M Anderson; Leah R Turner; Roberta A Thomas; Rossana Mirable; Rogely W Boyce
Journal:  J Histochem Cytochem       Date:  2006-07-24       Impact factor: 2.479

9.  2009 Biospecimen research network symposium: advancing cancer research through biospecimen science.

Authors:  Helen M Moore; Carolyn C Compton; Mark D Lim; Jimmie Vaught; Katerina N Christiansen; Joe Alper
Journal:  Cancer Res       Date:  2009-08-25       Impact factor: 12.701

10.  An exfoliation and enrichment strategy results in improved transcriptional profiles when compared to matched formalin fixed samples.

Authors:  Wilfrido D Mojica; Leighton Stein; Lesleyann Hawthorn
Journal:  BMC Clin Pathol       Date:  2007-08-03
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  29 in total

1.  Reporting recommendations for tumor marker prognostic studies (REMARK): explanation and elaboration.

Authors:  Douglas G Altman; Lisa M McShane; Willi Sauerbrei; Sheila E Taube
Journal:  BMC Med       Date:  2012-05-29       Impact factor: 8.775

2.  Reporting Recommendations for Tumor Marker Prognostic Studies (REMARK): explanation and elaboration.

Authors:  Douglas G Altman; Lisa M McShane; Willi Sauerbrei; Sheila E Taube
Journal:  PLoS Med       Date:  2012-05-29       Impact factor: 11.069

3.  Impact of warm ischemia on phosphorylated biomarkers in head and neck squamous cell carcinoma.

Authors:  Jacob I Tower; Mark W Lingen; Tanguy Y Seiwert; Alexander Langerman
Journal:  Am J Transl Res       Date:  2014-10-11       Impact factor: 4.060

Review 4.  Scientific considerations for global drug development.

Authors:  Jennifer L Wilson; Kit Wun Kathy Cheung; Lawrence Lin; Elizabeth A E Green; Analia I Porrás; Ling Zou; David Mukanga; Paul A Akpa; Delese Mimi Darko; Rae Yuan; Sheng Ding; Wiltshire C N Johnson; Howard A Lee; Emer Cooke; Carl C Peck; Steven E Kern; Dan Hartman; Yoshikazu Hayashi; Peter W Marks; Russ B Altman; Murray M Lumpkin; Kathleen M Giacomini; Terrence F Blaschke
Journal:  Sci Transl Med       Date:  2020-07-29       Impact factor: 17.956

5.  Achieving and Maintaining Sustainability in Biobanking Through Business Planning, Marketing, and Access.

Authors:  Marianne K Henderson; Kirstin Goldring; Daniel Simeon-Dubach
Journal:  Biopreserv Biobank       Date:  2016-11-18       Impact factor: 2.300

Review 6.  Biobanking in genomic medicine.

Authors:  Jane H Zhou; Aysegul A Sahin; Jeffrey N Myers
Journal:  Arch Pathol Lab Med       Date:  2015-06       Impact factor: 5.534

Review 7.  Identification of evidence-based biospecimen quality-control tools: a report of the International Society for Biological and Environmental Repositories (ISBER) Biospecimen Science Working Group.

Authors:  Fotini Betsou; Elaine Gunter; Judith Clements; Yvonne DeSouza; Katrina A B Goddard; Fiorella Guadagni; Wusheng Yan; Amy Skubitz; Stella Somiari; Trina Yeadon; Rodrigo Chuaqui
Journal:  J Mol Diagn       Date:  2012-11-27       Impact factor: 5.568

8.  Cryopreservation of viable human lung tissue for versatile post-thaw analyses and culture.

Authors:  John E Baatz; Danforth A Newton; Ellen C Riemer; Chadrick E Denlinger; E Ellen Jones; Richard R Drake; Demetri D Spyropoulos
Journal:  In Vivo       Date:  2014 Jul-Aug       Impact factor: 2.155

9.  Evaluating the effects of preanalytical variables on the stability of the human plasma proteome.

Authors:  Maria E Hassis; Richard K Niles; Miles N Braten; Matthew E Albertolle; H Ewa Witkowska; Carl A Hubel; Susan J Fisher; Katherine E Williams
Journal:  Anal Biochem       Date:  2015-03-10       Impact factor: 3.365

Review 10.  Publication of tumor marker research results: the necessity for complete and transparent reporting.

Authors:  Lisa M McShane; Daniel F Hayes
Journal:  J Clin Oncol       Date:  2012-10-15       Impact factor: 44.544

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