Literature DB >> 9788996

Directed evolution of a thermostable esterase.

L Giver1, A Gershenson, P O Freskgard, F H Arnold.   

Abstract

We have used in vitro evolution to probe the relationship between stability and activity in a mesophilic esterase. Previous studies of these properties in homologous enzymes evolved for function at different temperatures have suggested that stability at high temperatures is incompatible with high catalytic activity at low temperatures through mutually exclusive demands on enzyme flexibility. Six generations of random mutagenesis, recombination, and screening stabilized Bacillus subtilis p-nitrobenzyl esterase significantly (>14 degreesC increase in Tm) without compromising its catalytic activity at lower temperatures. Furthermore, analysis of the stabilities and activities of large numbers of random mutants indicates that these properties are not inversely correlated. Although enhanced thermostability does not necessarily come at the cost of activity, the process by which the molecule adapts is important. Mutations that increase thermostability while maintaining low-temperature activity are very rare. Unless both properties are constrained (by natural selection or screening) the evolution of one by the accumulation of single amino acid substitutions typically comes at the cost of the other, regardless of whether the two properties are inversely correlated or not correlated at all.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9788996      PMCID: PMC23604          DOI: 10.1073/pnas.95.22.12809

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

Review 1.  Temperature as a selective factor in protein evolution: the adaptational strategy of "compromise".

Authors:  G N Somero
Journal:  J Exp Zool       Date:  1975-10

2.  Effect of active site residues in barnase on activity and stability.

Authors:  E M Meiering; L Serrano; A R Fersht
Journal:  J Mol Biol       Date:  1992-06-05       Impact factor: 5.469

Review 3.  Bacterial evolution.

Authors:  C R Woese
Journal:  Microbiol Rev       Date:  1987-06

4.  A new way of enhancing the thermostability of proteases.

Authors:  T Imanaka; M Shibazaki; M Takagi
Journal:  Nature       Date:  1986 Dec 18-31       Impact factor: 49.962

5.  Thermal stability and protein structure.

Authors:  P Argos; M G Rossman; U M Grau; H Zuber; G Frank; J D Tratschin
Journal:  Biochemistry       Date:  1979-12-11       Impact factor: 3.162

6.  Combining thermostable mutations increases the stability of lambda repressor.

Authors:  R S Stearman; A D Frankel; E Freire; B S Liu; C O Pabo
Journal:  Biochemistry       Date:  1988-09-20       Impact factor: 3.162

7.  Tuning the activity of an enzyme for unusual environments: sequential random mutagenesis of subtilisin E for catalysis in dimethylformamide.

Authors:  K Chen; F H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  1993-06-15       Impact factor: 11.205

Review 8.  Structural and genetic analysis of protein stability.

Authors:  B W Matthews
Journal:  Annu Rev Biochem       Date:  1993       Impact factor: 23.643

9.  Mapping the stability determinants of bacterial tyrosyl transfer RNA synthetases by an experimental evolutionary approach.

Authors:  V Guez-Ivanier; M Hermann; D Baldwin; H Bedouelle
Journal:  J Mol Biol       Date:  1993-11-05       Impact factor: 5.469

10.  Mutations that significantly change the stability, flexibility and quaternary structure of the l-lactate dehydrogenase from Bacillus megaterium.

Authors:  M Kotik; H Zuber
Journal:  Eur J Biochem       Date:  1993-01-15
View more
  88 in total

1.  Computational method to reduce the search space for directed protein evolution.

Authors:  C A Voigt; S L Mayo; F H Arnold; Z G Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-27       Impact factor: 11.205

2.  Do ultrastable proteins from hyperthermophiles have high or low conformational rigidity?

Authors:  R Jaenicke
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

3.  The complete amino acid substitutions at position 131 that are positively involved in cold adaptation of subtilisin BPN'.

Authors:  S Taguchi; S Komada; H Momose
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

4.  Quantitative analysis of the effect of the mutation frequency on the affinity maturation of single chain Fv antibodies.

Authors:  P S Daugherty; G Chen; B L Iverson; G Georgiou
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

5.  A structural view of evolutionary divergence.

Authors:  B Spiller; A Gershenson; F H Arnold; R C Stevens
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

Review 6.  Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability.

Authors:  C Vieille; G J Zeikus
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

Review 7.  Improving the quality of industrially important enzymes by directed evolution.

Authors:  R R Chirumamilla; R Muralidhar; R Marchant; P Nigam
Journal:  Mol Cell Biochem       Date:  2001-08       Impact factor: 3.396

8.  eCodonOpt: a systematic computational framework for optimizing codon usage in directed evolution experiments.

Authors:  Gregory L Moore; Costas D Maranas
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

9.  High efficiency family shuffling based on multi-step PCR and in vivo DNA recombination in yeast: statistical and functional analysis of a combinatorial library between human cytochrome P450 1A1 and 1A2.

Authors:  V Abécassis; D Pompon; G Truan
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

10.  DNA family shuffling of hyperthermostable beta-glycosidases.

Authors:  Thijs Kaper; Stan J J Brouns; Ans C M Geerling; Willem M De Vos; John Van der Oost
Journal:  Biochem J       Date:  2002-12-01       Impact factor: 3.857

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.