Literature DB >> 8352587

Structural and genetic analysis of protein stability.

B W Matthews1.   

Abstract

One very encouraging development has been the freedom with which amino acid replacements can be introduced in a protein of interest. This has made it possible to obtain detailed structural and thermodynamic data on a wide variety of mutants that modify protein stability. Substitutions of solvent-exposed amino acids on the surfaces of proteins are seen to have little if any effect on protein stability or structure, leading to the view that it is the rigid parts of proteins that are critical for folding and stability. There is every reason to expect that it will be possible to rationalize the stabilities of mutant proteins from accurate knowledge of their structures. Substantial progress is being made in quantitating the interactions that determine and stabilize protein structures. Although not specifically the subject of this review, substantial progress is also being made in developing methods to engineer proteins of enhanced stability.

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Year:  1993        PMID: 8352587     DOI: 10.1146/annurev.bi.62.070193.001035

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  119 in total

1.  Substitution, insertion, deletion, suppression, and altered substrate specificity in functional protocatechuate 3,4-dioxygenases.

Authors:  D A D'Argenio; M W Vetting; D H Ohlendorf; L N Ornston
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

2.  The role of position a in determining the stability and oligomerization state of alpha-helical coiled coils: 20 amino acid stability coefficients in the hydrophobic core of proteins.

Authors:  K Wagschal; B Tripet; P Lavigne; C Mant; R S Hodges
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

3.  Protein folding and function: the N-terminal fragment in adenylate kinase.

Authors:  S Kumar; Y Y Sham; C J Tsai; R Nussinov
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

4.  A single disulfide bond restores thermodynamic and proteolytic stability to an extensively mutated protein.

Authors:  K R Roesler; A G Rao
Journal:  Protein Sci       Date:  2000-09       Impact factor: 6.725

5.  Molecular mimicry of substrate oxygen atoms by water molecules in the beta-amylase active site.

Authors:  G Pujadas; J Palau
Journal:  Protein Sci       Date:  2001-08       Impact factor: 6.725

6.  A test of proposed rules for helix capping: implications for protein design.

Authors:  Martin Sagermann; Lars-Göran Mårtensson; Walter A Baase; Brian W Matthews
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

7.  Heat capacity changes upon burial of polar and nonpolar groups in proteins.

Authors:  V V Loladze; D N Ermolenko; G I Makhatadze
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

8.  Amino-acid substitutions at the fully exposed P1 site of bovine pancreatic trypsin inhibitor affect its stability.

Authors:  D Krowarsch; J Otlewski
Journal:  Protein Sci       Date:  2001-04       Impact factor: 6.725

9.  Increasing protein conformational stability by optimizing beta-turn sequence.

Authors:  Saul R Trevino; Stephanie Schaefer; J Martin Scholtz; C Nick Pace
Journal:  J Mol Biol       Date:  2007-08-09       Impact factor: 5.469

10.  Structures of randomly generated mutants of T4 lysozyme show that protein stability can be enhanced by relaxation of strain and by improved hydrogen bonding via bound solvent.

Authors:  P Pjura; B W Matthews
Journal:  Protein Sci       Date:  1993-12       Impact factor: 6.725

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