Literature DB >> 9788945

Enzyme activity below the dynamical transition at 220 K.

R M Daniel1, J C Smith, M Ferrand, S Héry, R Dunn, J L Finney.   

Abstract

Enzyme activity requires the activation of anharmonic motions, such as jumps between potential energy wells. However, in general, the forms and time scales of the functionally important anharmonic dynamics coupled to motion along the reaction coordinate remain to be determined. In particular, the question arises whether the temperature-dependent dynamical transition from harmonic to anharmonic motion in proteins, which has been observed experimentally and using molecular dynamics simulation, involves the activation of motions required for enzyme function. Here we present parallel measurements of the activity and dynamics of a cryosolution of glutamate dehydrogenase as a function of temperature. The dynamical atomic fluctuations faster than approximately 100 ps were determined using neutron scattering. The results show that the enzyme remains active below the dynamical transition observed at approximately 220 K, i.e., at temperatures where no anharmonic motion is detected. Furthermore, the activity shows no significant deviation from Arrhenius behavior down to 190 K. The results indicate that the observed transition in the enzyme's dynamics is decoupled from the rate-limiting step along the reaction coordinate.

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Year:  1998        PMID: 9788945      PMCID: PMC1299924          DOI: 10.1016/S0006-3495(98)77694-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  18 in total

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Journal:  Nature       Date:  1992-06-04       Impact factor: 49.962

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Authors:  R C Hudson; L D Ruttersmith; R M Daniel
Journal:  Biochim Biophys Acta       Date:  1993-10-06

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  35 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-14       Impact factor: 11.205

2.  Enzyme activity and dynamics: xylanase activity in the absence of fast anharmonic dynamics.

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Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

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6.  On the nature of a glassy state of matter in a hydrated protein: Relation to protein function.

Authors:  M M Teeter; A Yamano; B Stec; U Mohanty
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-25       Impact factor: 11.205

7.  Solvent dependence of dynamic transitions in protein solutions.

Authors:  V Réat; R Dunn; M Ferrand; J L Finney; R M Daniel; J C Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-29       Impact factor: 11.205

8.  Dynamic transition associated with the thermal denaturation of a small Beta protein.

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Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

9.  Slaving: solvent fluctuations dominate protein dynamics and functions.

Authors:  P W Fenimore; H Frauenfelder; B H McMahon; F G Parak
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-20       Impact factor: 11.205

10.  Molecular dynamics decomposition of temperature-dependent elastic neutron scattering by a protein solution.

Authors:  Jennifer A Hayward; John L Finney; Roy M Daniel; Jeremy C Smith
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

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