Literature DB >> 9673664

Functional MRI statistical software packages: a comparative analysis.

S Gold1, B Christian, S Arndt, G Zeien, T Cizadlo, D L Johnson, M Flaum, N C Andreasen.   

Abstract

Currently, there are many choices of software packages for the analysis of fMRI data, each offering many options. Since no one package can meet the needs of all fMRI laboratories, it is helpful to know what each package offers. Several software programs were evaluated for comparison of their documentation, ease of learning and use, referencing, data input steps required, types of statistical methods offered, and output choices. The functionality of each package was detailed and discussed. AFNI 2.01, SPM96, Stimulate 5.0, MEDIMAX 2.01, and FIT were tested. FIASCO, Yale, and MEDx 2.0 were described but not tested. A description of each package is provided.

Mesh：

Year:  1998        PMID： 9673664      PMCID： PMC6873369     

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN： 1065-9471            Impact factor:   5.038


  27 in total

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Journal:  J Cereb Blood Flow Metab       Date:  1992-11       Impact factor: 6.200

2.  Within-subject transformations of PET regional cerebral blood flow data: ANCOVA, ratio, and Z-score adjustments on empirical data.

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Journal:  Hum Brain Mapp       Date:  1996       Impact factor: 5.038

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5.  Tests for distributed, nonfocal brain activations.

Authors:  K J Worsley; J B Poline; A C Vandal; K J Friston
Journal:  Neuroimage       Date:  1995-09       Impact factor: 6.556

6.  Sample size and statistical power in [15O]H2O studies of human cognition.

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Journal:  J Cereb Blood Flow Metab       Date:  1996-09       Impact factor: 6.200

7.  Enhanced detection of focal brain responses using intersubject averaging and change-distribution analysis of subtracted PET images.

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Journal:  J Cereb Blood Flow Metab       Date:  1988-10       Impact factor: 6.200

8.  A comparison of approaches to the statistical analysis of [15O]H2O PET cognitive activation studies.

Authors:  S Arndt; T Cizadlo; N C Andreasen; G Zeien; G Harris; D S O'Leary; G L Watkins; L L Ponto; R D Hichwa
Journal:  J Neuropsychiatry Clin Neurosci       Date:  1995       Impact factor: 2.198

9.  Real-time functional magnetic resonance imaging.

Authors:  R W Cox; A Jesmanowicz; J S Hyde
Journal:  Magn Reson Med       Date:  1995-02       Impact factor: 4.668

10.  Processing strategies for time-course data sets in functional MRI of the human brain.

Authors:  P A Bandettini; A Jesmanowicz; E C Wong; J S Hyde
Journal:  Magn Reson Med       Date:  1993-08       Impact factor: 4.668
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  37 in total

1.  Fiswidgets: a graphical computing environment for neuroimaging analysis.

Authors:  Kate Fissell; Eugene Tseytlin; Daniel Cunningham; Karthickeyan Iyer; Cameron S Carter; Walter Schneider; Jonathan D Cohen
Journal:  Neuroinformatics       Date:  2003

2.  Magnetic field shift due to mechanical vibration in functional magnetic resonance imaging.

Authors:  Bernd U Foerster; Dardo Tomasi; Elisabeth C Caparelli
Journal:  Magn Reson Med       Date:  2005-11       Impact factor: 4.668

3.  SmartPhantom--an fMRI simulator.

Authors:  Hu Cheng; Qun Zhao; George R Duensing; Williams A Edelstein; Diana Spencer; Nick Browne; Charles Saylor; Mark Limkeman
Journal:  Magn Reson Imaging       Date:  2006-02-20       Impact factor: 2.546

4.  Automated template-based PET region of interest analyses in the aging brain.

Authors:  Felice T Sun; Roberta A Schriber; Joel M Greenia; Jiawei He; Amy Gitcho; William J Jagust
Journal:  Neuroimage       Date:  2006-11-16       Impact factor: 6.556

5.  Discrete dynamic Bayesian network analysis of fMRI data.

Authors:  John Burge; Terran Lane; Hamilton Link; Shibin Qiu; Vincent P Clark
Journal:  Hum Brain Mapp       Date:  2009-01       Impact factor: 5.038

6.  Comparison of fMRI statistical software packages and strategies for analysis of images containing random and stimulus-correlated motion.

Authors:  Victoria L Morgan; Benoit M Dawant; Yong Li; David R Pickens
Journal:  Comput Med Imaging Graph       Date:  2007-06-15       Impact factor: 4.790

7.  The Fusiform Face Area responds automatically to statistical regularities optimal for face categorization.

Authors:  Roberto Caldara; Mohamed L Seghier
Journal:  Hum Brain Mapp       Date:  2009-05       Impact factor: 5.038

8.  A Java-based fMRI processing pipeline evaluation system for assessment of univariate general linear model and multivariate canonical variate analysis-based pipelines.

Authors:  Jing Zhang; Lichen Liang; Jon R Anderson; Lael Gatewood; David A Rottenberg; Stephen C Strother
Journal:  Neuroinformatics       Date:  2008-05-28

9.  The evolution of clinical functional imaging during the past 2 decades and its current impact on neurosurgical planning.

Authors:  J J Pillai
Journal:  AJNR Am J Neuroradiol       Date:  2010-02       Impact factor: 3.825

10.  Hippocampal M1 receptor function associated with spatial learning and memory in aged female rhesus macaques.

Authors:  Gwendolen E Haley; Chris Kroenke; Daniel Schwartz; Steven G Kohama; Henryk F Urbanski; Jacob Raber
Journal:  Age (Dordr)       Date:  2010-10-02
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