Literature DB >> 9671716

In search of a mutational hotspot.

Z Hatahet1, M Zhou, L J Reha-Krantz, S W Morrical, S S Wallace.   

Abstract

In vitro selection was used to define sequence contexts that significantly enhanced the mutagenic potential of 7, 8-dihydro-8-oxoguanine (8-oxoG). Contexts that simultaneously reduced the efficiency of 8-oxoG cleavage by formamidopyrimidine DNA N-glycosylase and increased the efficiency of misincorporating A opposite the lesion by DNA polymerase were isolated from a pool of 4(8) random octanucleotide sequences. Kinetic analysis showed that the combined effects of poor repair and high miscoding resulted in 10(2)- to 10(3)-fold increase in the mutagenic potential of 8-oxoG. Furthermore, the isolated sequence contexts correlated strongly with G --> T transversion hotspots in spontaneous mutational spectra reported for the Escherichia coli lacI and human p53 and factor IX genes. We present an example directly linking the interplay between DNA repair and replication to a "high risk sequence" for base substitution.

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Year:  1998        PMID: 9671716      PMCID: PMC21114          DOI: 10.1073/pnas.95.15.8556

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

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Journal:  Nucleic Acids Res       Date:  1991-07-11       Impact factor: 16.971

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3.  Analysis of nucleotide insertion and extension at 8-oxo-7,8-dihydroguanine by replicative T7 polymerase exo- and human immunodeficiency virus-1 reverse transcriptase using steady-state and pre-steady-state kinetics.

Authors:  L L Furge; F P Guengerich
Journal:  Biochemistry       Date:  1997-05-27       Impact factor: 3.162

Review 4.  Endogenous DNA damage as related to cancer and aging.

Authors:  B N Ames
Journal:  Mutat Res       Date:  1989-09       Impact factor: 2.433

5.  8-oxoguanine (8-hydroxyguanine) DNA glycosylase and its substrate specificity.

Authors:  J Tchou; H Kasai; S Shibutani; M H Chung; J Laval; A P Grollman; S Nishimura
Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-01       Impact factor: 11.205

6.  Formation of endonuclease III-sensitive sites as a consequence of oxygen radical attack on DNA.

Authors:  R Y Denq; I Fridovich
Journal:  Free Radic Biol Med       Date:  1989       Impact factor: 7.376

7.  Oxidative damage to DNA during aging: 8-hydroxy-2'-deoxyguanosine in rat organ DNA and urine.

Authors:  C G Fraga; M K Shigenaga; J W Park; P Degan; B N Ames
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

8.  MutT protein specifically hydrolyses a potent mutagenic substrate for DNA synthesis.

Authors:  H Maki; M Sekiguchi
Journal:  Nature       Date:  1992-01-16       Impact factor: 49.962

9.  Kinetics of extension of O6-methylguanine paired with cytosine or thymine in defined oligonucleotide sequences.

Authors:  M K Dosanjh; G Galeros; M F Goodman; B Singer
Journal:  Biochemistry       Date:  1991-12-10       Impact factor: 3.162

10.  Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG.

Authors:  S Shibutani; M Takeshita; A P Grollman
Journal:  Nature       Date:  1991-01-31       Impact factor: 49.962

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  17 in total

1.  Neighbouring bases in template influence base-pairing of isoguanine.

Authors:  Agnieszka M Maciejewska; Katarzyna D Lichota; Jarosław T Kuśmierek
Journal:  Biochem J       Date:  2003-02-01       Impact factor: 3.857

2.  Sequence-dependent variation in the reactivity of 8-Oxo-7,8-dihydro-2'-deoxyguanosine toward oxidation.

Authors:  Kok Seong Lim; Koli Taghizadeh; John S Wishnok; I Ramesh Babu; Vladimir Shafirovich; Nicholas E Geacintov; Peter C Dedon
Journal:  Chem Res Toxicol       Date:  2011-12-02       Impact factor: 3.739

3.  Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM.

Authors:  Rou-Jia Sung; Michael Zhang; Yan Qi; Gregory L Verdine
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

4.  Determinants of spontaneous mutation in the bacterium Escherichia coli as revealed by whole-genome sequencing.

Authors:  Patricia L Foster; Heewook Lee; Ellen Popodi; Jesse P Townes; Haixu Tang
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-12       Impact factor: 11.205

5.  Estimation of DNA sequence context-dependent mutation rates using primate genomic sequences.

Authors:  Wei Zhang; Gerard G Bouffard; Susan S Wallace; Jeffrey P Bond
Journal:  J Mol Evol       Date:  2007-08-04       Impact factor: 2.395

Review 6.  Biological properties of single chemical-DNA adducts: a twenty year perspective.

Authors:  James C Delaney; John M Essigmann
Journal:  Chem Res Toxicol       Date:  2007-12-12       Impact factor: 3.739

Review 7.  Bacteriophage T4 genome.

Authors:  Eric S Miller; Elizabeth Kutter; Gisela Mosig; Fumio Arisaka; Takashi Kunisawa; Wolfgang Rüger
Journal:  Microbiol Mol Biol Rev       Date:  2003-03       Impact factor: 11.056

Review 8.  Replisome structure suggests mechanism for continuous fork progression and post-replication repair.

Authors:  Wei Yang; Michael M Seidman; W Dean Rupp; Yang Gao
Journal:  DNA Repair (Amst)       Date:  2019-07-08

9.  DNA sequence context effects on the glycosylase activity of human 8-oxoguanine DNA glycosylase.

Authors:  Akira Sassa; William A Beard; Rajendra Prasad; Samuel H Wilson
Journal:  J Biol Chem       Date:  2012-09-18       Impact factor: 5.157

10.  Oxidative damage to the promoter region of SQSTM1/p62 is common to neurodegenerative disease.

Authors:  Yifeng Du; Michael C Wooten; Marie W Wooten
Journal:  Neurobiol Dis       Date:  2009-05-28       Impact factor: 5.996

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