Literature DB >> 18072751

Biological properties of single chemical-DNA adducts: a twenty year perspective.

James C Delaney1, John M Essigmann.   

Abstract

The genome and its nucleotide precursor pool are under sustained attack by radiation, reactive oxygen and nitrogen species, chemical carcinogens, hydrolytic reactions, and certain drugs. As a result, a large and heterogeneous population of damaged nucleotides forms in all cells. Some of the lesions are repaired, but for those that remain, there can be serious biological consequences. For example, lesions that form in DNA can lead to altered gene expression, mutation, and death. This perspective examines systems developed over the past 20 years to study the biological properties of single DNA lesions.

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Year:  2007        PMID： 18072751      PMCID： PMC2821157          DOI： 10.1021/tx700292a

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN： 0893-228X            Impact factor:   3.739


  387 in total

1.  Translesional synthesis on a DNA template containing N2-methyl-2'-deoxyguanosine catalyzed by the Klenow fragment of Escherichia coli DNA polymerase I.

Authors:  M Yasui; S Matsui; M Ihara; Y R Laxmi; S Shibutani; T Matsuda
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

2.  Gamma-radiolysis and hydroxyl radical produce interstrand cross-links in DNA involving thymidine.

Authors:  Hui Ding; Marc M Greenberg
Journal:  Chem Res Toxicol       Date:  2007-10-17       Impact factor: 3.739

3.  Guanine-thymine intrastrand cross-linked lesion containing oligonucleotides: from chemical synthesis to in vitro enzymatic replication.

Authors:  Sophie Bellon; Didier Gasparutto; Christine Saint-Pierre; Jean Cadet
Journal:  Org Biomol Chem       Date:  2006-09-19       Impact factor: 3.876

4.  Photochemically catalyzed generation of site-specific 8-nitroguanine adducts in DNA by the reaction of long-lived neutral guanine radicals with nitrogen dioxide.

Authors:  Vladimir Shafirovich; Steven Mock; Alexander Kolbanovskiy; Nicholas E Geacintov
Journal:  Chem Res Toxicol       Date:  2002-04       Impact factor: 3.739

5.  Structure of DNA polymerase beta with a benzo[c]phenanthrene diol epoxide-adducted template exhibits mutagenic features.

Authors:  Vinod K Batra; David D Shock; Rajendra Prasad; William A Beard; Esther W Hou; Lars C Pedersen; Jane M Sayer; Haruhiko Yagi; Subodh Kumar; Donald M Jerina; Samuel H Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-01       Impact factor: 11.205

6.  Site-specific frameshift mutagenesis by a propanodeoxyguanosine adduct positioned in the (CpG)4 hot-spot of Salmonella typhimurium hisD3052 carried on an M13 vector.

Authors:  M Benamira; U Singh; L J Marnett
Journal:  J Biol Chem       Date:  1992-11-05       Impact factor: 5.157

7.  Mutagenic potential of O4-methylthymine in vivo determined by an enzymatic approach to site-specific mutagenesis.

Authors:  B D Preston; B Singer; L A Loeb
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

8.  Site-specific mutagenicity of stereochemically defined 1,N2-deoxyguanosine adducts of trans-4-hydroxynonenal in mammalian cells.

Authors:  Priscilla H Fernandes; Hao Wang; Carmelo J Rizzo; R Stephen Lloyd
Journal:  Environ Mol Mutagen       Date:  2003       Impact factor: 3.216

9.  On the mechanism of frameshift (deletion) mutagenesis in vitro.

Authors:  S Shibutani; A P Grollman
Journal:  J Biol Chem       Date:  1993-06-05       Impact factor: 5.157

10.  In vivo bypass efficiencies and mutational signatures of the guanine oxidation products 2-aminoimidazolone and 5-guanidino-4-nitroimidazole.

Authors:  William L Neeley; James C Delaney; Paul T Henderson; John M Essigmann
Journal:  J Biol Chem       Date:  2004-08-06       Impact factor: 5.157
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  43 in total

Review 1.  Biologically relevant oxidants and terminology, classification and nomenclature of oxidatively generated damage to nucleobases and 2-deoxyribose in nucleic acids.

Authors:  Jean Cadet; Steffen Loft; Ryszard Olinski; Mark D Evans; Karol Bialkowski; J Richard Wagner; Peter C Dedon; Peter Møller; Marc M Greenberg; Marcus S Cooke
Journal:  Free Radic Res       Date:  2012-02-22

2.  Detection of 7-(2'-carboxyethyl)guanine but not 7-carboxymethylguanine in human liver DNA.

Authors:  Guang Cheng; Mingyao Wang; Peter W Villalta; Stephen S Hecht
Journal:  Chem Res Toxicol       Date:  2010-06-21       Impact factor: 3.739

Review 3.  Mass Spectrometry-Based Quantitative Strategies for Assessing the Biological Consequences and Repair of DNA Adducts.

Authors:  Changjun You; Yinsheng Wang
Journal:  Acc Chem Res       Date:  2016-01-13       Impact factor: 22.384

4.  The formamidopyrimidine derivative of 7-(2-oxoethyl)-2'-deoxyguanosine.

Authors:  Plamen P Christov; Ivan D Kozekov; Carmelo J Rizzo; Thomas M Harris
Journal:  Chem Res Toxicol       Date:  2008-08-09       Impact factor: 3.739

Review 5.  Chemical Analysis of DNA Damage.

Authors:  Yang Yu; Pengcheng Wang; Yuxiang Cui; Yinsheng Wang
Journal:  Anal Chem       Date:  2017-11-07       Impact factor: 6.986

Review 6.  DNA adducts: Formation, biological effects, and new biospecimens for mass spectrometric measurements in humans.

Authors:  Byeong Hwa Yun; Jingshu Guo; Medjda Bellamri; Robert J Turesky
Journal:  Mass Spectrom Rev       Date:  2018-06-11       Impact factor: 10.946

7.  Carcinogenicity and DNA adduct formation of 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone and enantiomers of its metabolite 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanol in F-344 rats.

Authors:  Silvia Balbo; Charles S Johnson; Ramesh C Kovi; Sandra A James-Yi; M Gerard O'Sullivan; Mingyao Wang; Chap T Le; Samir S Khariwala; Pramod Upadhyaya; Stephen S Hecht
Journal:  Carcinogenesis       Date:  2014-09-30       Impact factor: 4.944

8.  Nucleotide excision repair of a DNA interstrand cross-link produces single- and double-strand breaks.

Authors:  Xiaohua Peng; Avik K Ghosh; Bennett Van Houten; Marc M Greenberg
Journal:  Biochemistry       Date:  2010-01-12       Impact factor: 3.162

Review 9.  Systems analysis of protein modification and cellular responses induced by electrophile stress.

Authors:  Aaron T Jacobs; Lawrence J Marnett
Journal:  Acc Chem Res       Date:  2010-05-18       Impact factor: 22.384

10.  Pyrosequencing: applicability for studying DNA damage-induced mutagenesis.

Authors:  Irina G Minko; Lauriel F Earley; Kimberly E Larlee; Ying-Chih Lin; R Stephen Lloyd
Journal:  Environ Mol Mutagen       Date:  2014-06-24       Impact factor: 3.216
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