Literature DB >> 9652094

Mathematical model of the fission yeast cell cycle with checkpoint controls at the G1/S, G2/M and metaphase/anaphase transitions.

B Novak1, A Csikasz-Nagy, B Gyorffy, K Chen, J J Tyson.   

Abstract

All events of the fission yeast cell cycle can be orchestrated by fluctuations of a single cyclin-dependent protein kinase, the Cdc13/Cdc2 heterodimer. The G1/S transition is controlled by interactions of Cdc13/Cdc2 and its stoichiometric inhibitor, Rum1. The G2/M transition is regulated by a kinase-phosphatase pair, Wee1 and Cdc25, which determine the phosphorylation state of the Tyr-15 residue of Cdc2. The meta/anaphase transition is controlled by interactions between Cdc13/Cdc2 and the anaphase promoting complex, which labels Cdc13 subunits for proteolysis. We construct a mathematical model of fission yeast growth and division that encompasses all three crucial checkpoint controls. By numerical simulations we show that the model is consistent with a broad selection of cell cycle mutants, and we predict the phenotypes of several multiple-mutant strains that have not yet been constructed.

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Year:  1998        PMID: 9652094     DOI: 10.1016/s0301-4622(98)00133-1

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  40 in total

1.  Computation, prediction, and experimental tests of fitness for bacteriophage T7 mutants with permuted genomes.

Authors:  D Endy; L You; J Yin; I J Molineux
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

2.  Modeling the fission yeast cell cycle: quantized cycle times in wee1- cdc25Delta mutant cells.

Authors:  A Sveiczer; A Csikasz-Nagy; B Gyorffy; J J Tyson; B Novak
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-05       Impact factor: 11.205

Review 3.  Hysteresis meets the cell cycle.

Authors:  Mark J Solomon
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-27       Impact factor: 11.205

4.  What it takes to understand and cure a living system: computational systems biology and a systems biology-driven pharmacokinetics-pharmacodynamics platform.

Authors:  Maciej Swat; Szymon M Kiełbasa; Sebastian Polak; Brett Olivier; Frank J Bruggeman; Mark Quinton Tulloch; Jacky L Snoep; Arthur J Verhoeven; Hans V Westerhoff
Journal:  Interface Focus       Date:  2010-12-08       Impact factor: 3.906

5.  Potential and flux landscapes quantify the stability and robustness of budding yeast cell cycle network.

Authors:  Jin Wang; Chunhe Li; Erkang Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-14       Impact factor: 11.205

6.  Process-based network decomposition reveals backbone motif structure.

Authors:  Guanyu Wang; Chenghang Du; Hao Chen; Rahul Simha; Yongwu Rong; Yi Xiao; Chen Zeng
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-24       Impact factor: 11.205

7.  Analysis of a generic model of eukaryotic cell-cycle regulation.

Authors:  Attila Csikász-Nagy; Dorjsuren Battogtokh; Katherine C Chen; Béla Novák; John J Tyson
Journal:  Biophys J       Date:  2006-03-31       Impact factor: 4.033

8.  Emergence of protocellular growth laws.

Authors:  Tristan Rocheleau; Steen Rasmussen; Peter E Nielsen; Martin N Jacobi; Hans Ziock
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2007-10-29       Impact factor: 6.237

9.  Cell cycle regulated transcription of heterochromatin in mammals vs. fission yeast: functional conservation or coincidence?

Authors:  Junjie Lu; David M Gilbert
Journal:  Cell Cycle       Date:  2008-04-29       Impact factor: 4.534

10.  Analysis of Chinese hamster ovary cell metabolism through a combined computational and experimental approach.

Authors:  Ning Chen; Mark H Bennett; Cleo Kontoravdi
Journal:  Cytotechnology       Date:  2013-11-29       Impact factor: 2.058

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