Literature DB >> 10884416

Modeling the fission yeast cell cycle: quantized cycle times in wee1- cdc25Delta mutant cells.

A Sveiczer1, A Csikasz-Nagy, B Gyorffy, J J Tyson, B Novak.   

Abstract

A detailed mathematical model for the fission yeast mitotic cycle is developed based on positive and negative feedback loops by which Cdc13/Cdc2 kinase activates and inactivates itself. Positive feedbacks are created by Cdc13/Cdc2-dependent phosphorylation of specific substrates: inactivating its negative regulators (Rum1, Ste9 and Wee1/Mik1) and activating its positive regulator (Cdc25). A slow negative feedback loop is turned on during mitosis by activation of Slp1/anaphase-promoting complex (APC), which indirectly re-activates the negative regulators, leading to a drop in Cdc13/Cdc2 activity and exit from mitosis. The model explains how fission yeast cells can exit mitosis in the absence of Ste9 (Cdc13 degradation) and Rum1 (an inhibitor of Cdc13/Cdc2). We also show that, if the positive feedback loops accelerating the G(2)/M transition (through Wee1 and Cdc25) are weak, then cells can reset back to G(2) from early stages of mitosis by premature activation of the negative feedback loop. This resetting can happen more than once, resulting in a quantized distribution of cycle times, as observed experimentally in wee1(-) cdc25Delta mutant cells. Our quantitative description of these quantized cycles demonstrates the utility of mathematical modeling, because these cycles cannot be understood by intuitive arguments alone.

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Year:  2000        PMID: 10884416      PMCID: PMC16636          DOI: 10.1073/pnas.97.14.7865

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

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Authors:  B Novak; A Csikasz-Nagy; B Gyorffy; K Nasmyth; J J Tyson
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2.  A minimal cascade model for the mitotic oscillator involving cyclin and cdc2 kinase.

Authors:  A Goldbeter
Journal:  Proc Natl Acad Sci U S A       Date:  1991-10-15       Impact factor: 11.205

3.  Regulation of the anaphase-promoting complex/cyclosome by bimAAPC3 and proteolysis of NIMA.

Authors:  X S Ye; R R Fincher; A Tang; A H Osmani; S A Osmani
Journal:  Mol Biol Cell       Date:  1998-11       Impact factor: 4.138

4.  A fission yeast homolog of CDC20/p55CDC/Fizzy is required for recovery from DNA damage and genetically interacts with p34cdc2.

Authors:  T Matsumoto
Journal:  Mol Cell Biol       Date:  1997-02       Impact factor: 4.272

5.  Negative regulation of mitosis by wee1+, a gene encoding a protein kinase homolog.

Authors:  P Russell; P Nurse
Journal:  Cell       Date:  1987-05-22       Impact factor: 41.582

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Authors:  F Kippert; P Hunt
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Authors:  H Yamano; J Gannon; T Hunt
Journal:  EMBO J       Date:  1996-10-01       Impact factor: 11.598

8.  An amplified sensitivity arising from covalent modification in biological systems.

Authors:  A Goldbeter; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

9.  p25rum1 orders S phase and mitosis by acting as an inhibitor of the p34cdc2 mitotic kinase.

Authors:  J Correa-Bordes; P Nurse
Journal:  Cell       Date:  1995-12-15       Impact factor: 41.582

10.  Pyp3 PTPase acts as a mitotic inducer in fission yeast.

Authors:  J B Millar; G Lenaers; P Russell
Journal:  EMBO J       Date:  1992-12       Impact factor: 11.598

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  33 in total

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3.  Dynamics of the cell cycle: checkpoints, sizers, and timers.

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6.  Process-based network decomposition reveals backbone motif structure.

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Review 7.  Economy, speed and size matter: evolutionary forces driving nuclear genome miniaturization and expansion.

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8.  Linking cell division to cell growth in a spatiotemporal model of the cell cycle.

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9.  Analysis of a generic model of eukaryotic cell-cycle regulation.

Authors:  Attila Csikász-Nagy; Dorjsuren Battogtokh; Katherine C Chen; Béla Novák; John J Tyson
Journal:  Biophys J       Date:  2006-03-31       Impact factor: 4.033

Review 10.  The role of modelling in identifying drug targets for diseases of the cell cycle.

Authors:  Robert G Clyde; James L Bown; Ted R Hupp; Nikolai Zhelev; John W Crawford
Journal:  J R Soc Interface       Date:  2006-10-22       Impact factor: 4.118

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