Literature DB >> 24292563

Analysis of Chinese hamster ovary cell metabolism through a combined computational and experimental approach.

Ning Chen1, Mark H Bennett, Cleo Kontoravdi.   

Abstract

Optimization of cell culture processes can benefit from the systematic analysis of experimental data and their organization in mathematical models, which can be used to decipher the effect of individual process variables on multiple outputs of interest. Towards this goal, a kinetic model of cytosolic glucose metabolism coupled with a population-level model of Chinese hamster ovary cells was used to analyse metabolic behavior under batch and fed-batch cell culture conditions. The model was parameterized using experimental data for cell growth dynamics, extracellular and intracellular metabolite profiles. The results highlight significant differences between the two culture conditions in terms of metabolic efficiency and motivate the exploration of lactate as a secondary carbon source. Finally, the application of global sensitivity analysis to the model parameters highlights the need for additional experimental information on cell cycle distribution to complement metabolomic analyses with a view to parameterize kinetic models.

Entities:  

Year:  2013        PMID: 24292563      PMCID: PMC4235950          DOI: 10.1007/s10616-013-9648-1

Source DB:  PubMed          Journal:  Cytotechnology        ISSN: 0920-9069            Impact factor:   2.058


  60 in total

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Journal:  J Theor Biol       Date:  1990-03-22       Impact factor: 2.691

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Authors:  Ning Chen; Georgios C Koumpouras; Karen M Polizzi; Cleo Kontoravdi
Journal:  Bioprocess Biosyst Eng       Date:  2012-08       Impact factor: 3.210

4.  Intracellular nucleotide and nucleotide sugar contents of cultured CHO cells determined by a fast, sensitive, and high-resolution ion-pair RP-HPLC.

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5.  Pyruvate dehydrogenase E1 alpha isoform in rat testis: cDNA cloning, characterization, and biochemical comparison of the recombinant testis and liver enzymes.

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Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  1998-05       Impact factor: 2.231

6.  Profiling of N-glycosylation gene expression in CHO cell fed-batch cultures.

Authors:  Danny Chee Furng Wong; Niki Soo Ching Wong; John Soo Yang Goh; Lee May May; Miranda Gek Sim Yap
Journal:  Biotechnol Bioeng       Date:  2010-10-15       Impact factor: 4.530

7.  Partial purification and kinetic properties of ribose-5-phosphate ketol-isomerase and ribulose-5-phosphate 3-epimerase from various sources.

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8.  Model of 2,3-bisphosphoglycerate metabolism in the human erythrocyte based on detailed enzyme kinetic equations: in vivo kinetic characterization of 2,3-bisphosphoglycerate synthase/phosphatase using 13C and 31P NMR.

Authors:  P J Mulquiney; W A Bubb; P W Kuchel
Journal:  Biochem J       Date:  1999-09-15       Impact factor: 3.857

9.  Transaldolase B of Escherichia coli K-12: cloning of its gene, talB, and characterization of the enzyme from recombinant strains.

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Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

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Authors:  S Patra; S Ghosh; S Bera; A Roy; S Ray; M Ray
Journal:  Biochemistry (Mosc)       Date:  2009-07       Impact factor: 2.487

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  2 in total

Review 1.  What can mathematical modelling say about CHO metabolism and protein glycosylation?

Authors:  Sarah N Galleguillos; David Ruckerbauer; Matthias P Gerstl; Nicole Borth; Michael Hanscho; Jürgen Zanghellini
Journal:  Comput Struct Biotechnol J       Date:  2017-01-28       Impact factor: 7.271

2.  Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes.

Authors:  John Schmitt; Brandon Downey; Justin Beller; Brian Russell; Anthony Quach; David Lyon; Meredith Curran; Bhanu Chandra Mulukutla; Chia Chu
Journal:  Biotechnol Bioeng       Date:  2019-05-27       Impact factor: 4.530

  2 in total

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