Literature DB >> 9609666

Molecular-cytogenetic characterization of the Vicia faba genome--heterochromatin differentiation, replication patterns and sequence localization.

J Fuchs1, S Strehl, A Brandes, D Schweizer, I Schubert.   

Abstract

A comprehensive survey of the molecular-cytogenetic features of the Vicia faba chromosome complement (2n = 12) is given. It includes previous as well as new original data. Various Giemsa, restriction endonuclease and fluorochrome banding patterns, azacytidine-mediated segment extension, replication patterns, lateral A/T asymmetry and sequence localization data for tandemly arranged simple sequence repeats, dispersed repeats and coding sequences as well as histone acetylation patterns are considered. This allows not only to distinguish and characterize telomeres, subtelomeres, centromeres and the NOR, but also the structure of the 5S rRNA gene loci and two main types of interstitial heterochromatin. Additionally, it offers physical landmarks within euchromatic areas. Thus, the field bean genome, exemplified by the reconstructed karyotype ACB, belongs to the cytogenetically best investigated plant genomes.

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Year:  1998        PMID: 9609666     DOI: 10.1023/a:1009215802737

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  41 in total

1.  Chromatid aberrations induced by gamma irradiation. I. The structure and frequency of chromatid interchanges in diploid and tetraploid cells of Vicia faba.

Authors:  H J EVANS
Journal:  Genetics       Date:  1961-03       Impact factor: 4.562

2.  Structure and chromosomal localization of DNA sequences related to ribosomal subrepeats in Vicia faba.

Authors:  F Maggini; R Cremonini; C Zolfino; G F Tucci; R D'Ovidio; V Delre; C DePace; G T Scarascia Mugnozza; P G Cionini
Journal:  Chromosoma       Date:  1991-05       Impact factor: 4.316

3.  There is an upper limit of chromosome size for normal development of an organism.

Authors:  I Schubert; J L Oud
Journal:  Cell       Date:  1997-02-21       Impact factor: 41.582

4.  On the induction of segment extension and chromatid structural changes in Vicia faba chromosomes after treatment with 5-azacytidine and 5-azadeoxycytidine.

Authors:  V Fucík; A Michaelis; R Rieger
Journal:  Mutat Res       Date:  1970-06       Impact factor: 2.433

5.  Chemical differentiation with fluorescent alkylating agents in Vicia faba metaphase chromosomes.

Authors:  T Caspersson; L Zech; E J Modest; G E Foley; U Wagh; E Simonsson
Journal:  Exp Cell Res       Date:  1969-11       Impact factor: 3.905

6.  Centromeric asymmetry and induction of translocations and sister chromatid exchanges in mouse chromosomes.

Authors:  M S Lin; R L Davidson
Journal:  Nature       Date:  1975-03-27       Impact factor: 49.962

7.  Lateral asymmetry in human constitutive heterochromatin.

Authors:  R R Angell; P A Jacobs
Journal:  Chromosoma       Date:  1975-08-11       Impact factor: 4.316

8.  Flow karyotyping and sorting of Vicia faba chromosomes.

Authors:  S Lucretti; J Doležel; I Schubert; J Fuchs
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

9.  Differential immunostaining of plant chromosomes by antibodies recognizing acetylated histone H4 variants.

Authors:  A Houben; N D Belyaev; B M Turner; I Schubert
Journal:  Chromosome Res       Date:  1996-04       Impact factor: 5.239

10.  Localization of seed protein genes on metaphase chromosomes of Vicia faba via fluorescence in situ hybridization.

Authors:  J Fuchs; I Schubert
Journal:  Chromosome Res       Date:  1995-03       Impact factor: 5.239

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  25 in total

1.  Physical localisation of transgenes on Vicia faba chromosomes.

Authors:  R J Snowdon; P Böttinger; T Pickardt; W Köhler; W Friedt
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

2.  Histone H4 acetylation of euchromatin and heterochromatin is cell cycle dependent and correlated with replication rather than with transcription.

Authors:  Z Jasencakova; A Meister; J Walter; B M Turner; I Schubert
Journal:  Plant Cell       Date:  2000-11       Impact factor: 11.277

3.  Karyotype analysis of four Vicia species using in situ hybridization with repetitive sequences.

Authors:  Alice Navrátilová; Pavel Neumann; Jirí Macas
Journal:  Ann Bot       Date:  2003-06       Impact factor: 4.357

4.  TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads.

Authors:  Petr Novák; Laura Ávila Robledillo; Andrea Koblížková; Iva Vrbová; Pavel Neumann; Jirí Macas
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

Review 5.  Chromosome maps of legumes.

Authors:  Nobuko Ohmido; Shusei Sato; Satoshi Tabata; Kiichi Fukui
Journal:  Chromosome Res       Date:  2007       Impact factor: 5.239

Review 6.  Fluorescence in situ hybridization in plants: recent developments and future applications.

Authors:  Jiming Jiang
Journal:  Chromosome Res       Date:  2019-03-09       Impact factor: 5.239

7.  A 330 kb CENP-A binding domain and altered replication timing at a human neocentromere.

Authors:  A W Lo; J M Craig; R Saffery; P Kalitsis; D V Irvine; E Earle; D J Magliano; K H Choo
Journal:  EMBO J       Date:  2001-04-17       Impact factor: 11.598

8.  Comparative genomic in situ hybridization (cGISH) analysis on plant chromosomes revealed by labelled Arabidopsis DNA.

Authors:  J F Zoller; Y Yang; R G Herrmann; U Hohmann
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

9.  A new chromosome fluorescence banding technique combining DAPI staining with image analysis in plants.

Authors:  Jing Yu Liu; Chao Wen She; Zhong Li Hu; Zhi Yong Xiong; Li Hua Liu; Yun Chun Song
Journal:  Chromosoma       Date:  2004-06-09       Impact factor: 4.316

10.  Heterochromatin characterization through differential fluorophore binding pattern in some species of Vigna Savi.

Authors:  Anju Shamurailatpam; Latha Madhavan; Shrirang Ramachandra Yadav; Kangila Venkatraman Bhat; Satyawada Rama Rao
Journal:  Protoplasma       Date:  2014-10-11       Impact factor: 3.356

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