Literature DB >> 25303854

Heterochromatin characterization through differential fluorophore binding pattern in some species of Vigna Savi.

Anju Shamurailatpam1, Latha Madhavan, Shrirang Ramachandra Yadav, Kangila Venkatraman Bhat, Satyawada Rama Rao.   

Abstract

Heterochromatin regions are the most intensively studied and best known chromosome markers in plants. In Vigna species, blocks of constitutive heterochromatin were found either in the terminal or interstitial region of the chromosomes. The number and distribution of CMA(+) and DAPI(+) binding sites exhibit high chromosomal variability with characteristic unique banding patterns in all the eight taxa. A predominant feature was observed, i.e., most of the CMA(+) binding sites were in the terminal region of the short arm of some chromosomes while DAPI(+) binding sites were found mostly in the intercalary region of the chromosomes. The higher divergence in the heterochromatin blocks, as revealed by chromomycin A3 (CMA) binding pattern, in a few taxa, viz. Vigna glabrescens, Vigna khandalensis, and Vigna mungo, suggests that the processes of divergent evolution of repetitive sequences in genomic DNA involve a guanine-cytosine (GC)-rich region. On the contrary, Vigna dalzelliana had shown a prominent adenine-thymine (AT)-rich repetitive DNA sequence in terminal regions in the short arm of chromosomes while Vigna umbellata had shown in interstitial regions. The presence of prominent heterochromatic-rich regions, either GC- or AT-rich regions, does facilitate the rate of chromosomal rearrangements leading to restructuring of the karyotypes and thereby helping the species to attempt structural alterations as means of speciation.

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Year:  2014        PMID: 25303854     DOI: 10.1007/s00709-014-0708-y

Source DB:  PubMed          Journal:  Protoplasma        ISSN: 0033-183X            Impact factor:   3.356


  18 in total

1.  Molecular evolution and phylogenetic implications of internal transcribed spacer sequences of nuclear ribosomal DNA in the Phaseolus-Vigna complex.

Authors:  S Goel; S N Raina; Y Ogihara
Journal:  Mol Phylogenet Evol       Date:  2002-01       Impact factor: 4.286

2.  Cytogenetic map of common bean (Phaseolus vulgaris L.).

Authors:  Artur Fonsêca; Joana Ferreira; Tiago Ribeiro Barros dos Santos; Magdalena Mosiolek; Elisa Bellucci; James Kami; Paul Gepts; Valérie Geffroy; Dieter Schweizer; Karla G B dos Santos; Andrea Pedrosa-Harand
Journal:  Chromosome Res       Date:  2010-05-07       Impact factor: 5.239

Review 3.  The paradox of functional heterochromatin.

Authors:  Patrizio Dimitri; Nicoletta Corradini; Fabrizio Rossi; Fiammetta Vernì
Journal:  Bioessays       Date:  2005-01       Impact factor: 4.345

4.  Comparative analysis (Hippotragini versus Caprini, Bovidae) of X-chromosome's constitutive heterochromatin by in situ restriction endonuclease digestion: X-chromosome constitutive heterochromatin evolution.

Authors:  Raquel Chaves; Sara Santos; Henrique Guedes-Pinto
Journal:  Genetica       Date:  2004-07       Impact factor: 1.082

5.  Genomic distribution of heterochromatic sequences in equids: implications to rapid chromosomal evolution.

Authors:  H A Wichman; C T Payne; O A Ryder; M J Hamilton; M Maltbie; R J Baker
Journal:  J Hered       Date:  1991 Sep-Oct       Impact factor: 2.645

6.  Cytological investigation of Haplopappus gracilis (Nutt.) Gray: 5-methylcytosine-rich regions, fluorochrome banding and chromatin sensitivity to DNase I digestion.

Authors:  M Ruffini Castiglione; M Frediani; G Venora; R Cremonini
Journal:  Protoplasma       Date:  2008-07-10       Impact factor: 3.356

7.  Chromosome banding. Stain combinations for specific regions.

Authors:  D Schweizer; P F Ambros
Journal:  Methods Mol Biol       Date:  1994

8.  Molecular-cytogenetic characterization of the Vicia faba genome--heterochromatin differentiation, replication patterns and sequence localization.

Authors:  J Fuchs; S Strehl; A Brandes; D Schweizer; I Schubert
Journal:  Chromosome Res       Date:  1998-04       Impact factor: 5.239

Review 9.  Drosophila melanogaster as a model for studying protein-encoding genes that are resident in constitutive heterochromatin.

Authors:  N Corradini; F Rossi; E Giordano; R Caizzi; F Verní; P Dimitri
Journal:  Heredity (Edinb)       Date:  2006-11-01       Impact factor: 3.821

10.  Fluorescent banding pattern analysis of eight taxa of Phaseolus and Vigna in relation to their phylogenetic relationships.

Authors:  J Y Zheng; M Nakata; K Irifune; R Tanaka; H Morikawa
Journal:  Theor Appl Genet       Date:  1993-10       Impact factor: 5.699

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  2 in total

1.  Heterochromatin distribution and comparative karyo-morphological studies in Vignaumbellata Thunberg, 1969 and V.aconitifolia Jacquin, 1969 (Fabaceae) accessions.

Authors:  Anju Shamurailatpam; Latha Madhavan; Shrirang Ramachandra Yadav; Kangila Venkatraman Bhat; Satyawada Rama Rao
Journal:  Comp Cytogenet       Date:  2015-03-31       Impact factor: 1.800

2.  Chromosomal variability in Brazilian species of Anthurium Schott (Araceae): Heterochromatin, polyploidy, and B chromosomes.

Authors:  Sarah do Nascimento; Marcus Alberto Nadruz Coelho; Joel M P Cordeiro; Leonardo P Felix
Journal:  Genet Mol Biol       Date:  2019-11-14       Impact factor: 1.771

  2 in total

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