Literature DB >> 7608983

Microsatellite polymorphisms reveal phylogenetic relationships in primates.

E Meyer1, P Wiegand, S P Rand, D Kuhlmann, M Brack, B Brinkmann.   

Abstract

We amplified, via PCR, DNA segments from intron 1 of the tyrosine hydroxylase gene (TH01) and intron 40 of the von Willebrand factor gene (VWA) in ten nonhuman primate genera. In humans both introns contain polymorphic microsatellites with tetrameric repeats. Compared to the allelic ranges in human populations relatively short repeat arrays could be detected for the nonhuman primates typed, presumably reflecting an ancient precursor state at both microsatellite loci. Furthermore, our results provide evidence for an association of the average number of repeats present in different primate genera and their divergence time from man. DNA sequencing of VWA orthologues revealed a relatively high variability in the arrangement of repeats in the 5'-repeat arrays, the generation of which could probably be explained by polar mutational events.

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Year:  1995        PMID: 7608983     DOI: 10.1007/BF00174036

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  26 in total

1.  Analysis of the VNTR locus D1S80 by the PCR followed by high-resolution PAGE.

Authors:  B Budowle; R Chakraborty; A M Giusti; A J Eisenberg; R C Allen
Journal:  Am J Hum Genet       Date:  1991-01       Impact factor: 11.025

2.  Evolution of repeated DNA sequences by unequal crossover.

Authors:  G P Smith
Journal:  Science       Date:  1976-02-13       Impact factor: 47.728

3.  Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups.

Authors:  A Edwards; H A Hammond; L Jin; C T Caskey; R Chakraborty
Journal:  Genomics       Date:  1992-02       Impact factor: 5.736

4.  Polymorphisms at VNTR loci suggest homogeneity of the white population of Utah.

Authors:  R Chakraborty; S P Daiger
Journal:  Hum Biol       Date:  1991-10       Impact factor: 0.553

5.  Population data and forensic efficiency values for the STR systems HumVWA, HumMBP and HumFABP.

Authors:  A Möller; P Wiegand; C Grüschow; S A Seuchter; M P Baur; B Brinkmann
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

6.  Polymerase chain reaction amplification products separated on rehydratable polyacrylamide gels and stained with silver.

Authors:  R C Allen; G Graves; B Budowle
Journal:  Biotechniques       Date:  1989 Jul-Aug       Impact factor: 1.993

7.  Evolutionary transience of hypervariable minisatellites in man and the primates.

Authors:  I C Gray; A J Jeffreys
Journal:  Proc Biol Sci       Date:  1991-03-22       Impact factor: 5.349

8.  Identification of repeat sequence heterogeneity at the polymorphic short tandem repeat locus HUMTH01[AATG]n and reassignment of alleles in population analysis by using a locus-specific allelic ladder.

Authors:  C Puers; H A Hammond; L Jin; C T Caskey; J W Schumm
Journal:  Am J Hum Genet       Date:  1993-10       Impact factor: 11.025

9.  Different types of structural variation in STRs: HumFES/FPS, HumVWA and HumD21S11.

Authors:  A Möller; E Meyer; B Brinkmann
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

10.  High resolution of human evolutionary trees with polymorphic microsatellites.

Authors:  A M Bowcock; A Ruiz-Linares; J Tomfohrde; E Minch; J R Kidd; L L Cavalli-Sforza
Journal:  Nature       Date:  1994-03-31       Impact factor: 49.962

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  10 in total

Review 1.  DNA typing in wildlife crime: recent developments in species identification.

Authors:  Shanan S Tobe; Adrian Linacre
Journal:  Forensic Sci Med Pathol       Date:  2010-06-05       Impact factor: 2.007

2.  Mutation rate in human microsatellites: influence of the structure and length of the tandem repeat.

Authors:  B Brinkmann; M Klintschar; F Neuhuber; J Hühne; B Rolf
Journal:  Am J Hum Genet       Date:  1998-06       Impact factor: 11.025

3.  Short tandem repeat polymorphisms in Japanese macaques: their short repeat lengths and low informativeness.

Authors:  Y Watanabe; T Sakazume; K Kurosaki; H Oota; K Washio-Watanabe; S Ueda
Journal:  Mamm Genome       Date:  1996-05       Impact factor: 2.957

Review 4.  Factors affecting levels of genetic diversity in natural populations.

Authors:  W Amos; J Harwood
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1998-02-28       Impact factor: 6.237

5.  Genetic variation in ecoraces of tropical tasar silkworm, Antheraea mylitta using SSR markers.

Authors:  G Renuka; G Shamitha
Journal:  J Genet       Date:  2016-12       Impact factor: 1.166

6.  A study of the short tandem repeat systems HUMVWA and HUMTH01 in an Austrian population sample.

Authors:  M Klintschar; M Kubat
Journal:  Int J Legal Med       Date:  1995       Impact factor: 2.686

7.  Length variation of CAG/CAA trinucleotide repeats in natural populations of Drosophila melanogaster and its relation to the recombination rate.

Authors:  Y Michalakis; M Veuille
Journal:  Genetics       Date:  1996-08       Impact factor: 4.562

8.  Survey and analysis of microsatellites in the silkworm, Bombyx mori: frequency, distribution, mutations, marker potential and their conservation in heterologous species.

Authors:  M Dharma Prasad; M Muthulakshmi; M Madhu; Sunil Archak; K Mita; J Nagaraju
Journal:  Genetics       Date:  2004-09-15       Impact factor: 4.562

Review 9.  Post-genomic era and gene discovery for psychiatric diseases: there is a new art of the trade? The example of the HUMTH01 microsatellite in the Tyrosine Hydroxylase gene.

Authors:  Rolando Meloni; Nicole Faucon Biguet; Jacques Mallet
Journal:  Mol Neurobiol       Date:  2002 Oct-Dec       Impact factor: 5.682

10.  High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots.

Authors:  Andrew T M Bagshaw; Joel P W Pitt; Neil J Gemmell
Journal:  BMC Genomics       Date:  2008-01-28       Impact factor: 3.969

  10 in total

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