Literature DB >> 9504907

Dhh1p, a putative RNA helicase, associates with the general transcription factors Pop2p and Ccr4p from Saccharomyces cerevisiae.

H Hata1, H Mitsui, H Liu, Y Bai, C L Denis, Y Shimizu, A Sakai.   

Abstract

The POP2 (Caf1) protein in Saccharomyces cerevisiae affects a variety of transcriptional processes and is a component of the Ccr4p complex. We have isolated five multicopy suppressor genes of a pop2 deletion mutation: CCR4, DHH1 (a putative RNA helicase), PKC1, STM1, and MPT5 (multicopy suppressor of pop two). Overexpression of either the CCR4 or DHH1 genes effectively suppressed phenotypes associated with pop2 mutant cells; overexpression of PKC1, STM1, or MPT5 genes produced only partial suppression. Disruption of the CCR4 or DHH1 genes resulted in phenotypes similar to those observed for pop2 cells. In addition, overexpression of the DHH1 gene also suppressed the ccr4 mutation, suggesting a close relationship between the POP2, CCR4, and DHH1 genes. Two-hybrid analysis and coimmunoprecipitation experiments revealed that Pop2p and Dhh1p interact physically, and these and other data suggest that Dhh1p is also a component of the Ccr4p complex. Finally, we investigated the genetic interaction between factors associated with POP2 and the PKC1 pathway. The temperature-sensitive growth defect of dhh1 or mpt5 cells was suppressed by overexpression of PKC1, and the defect of mpk1 cells was suppressed by overexpression of MPT5. These results and phenotypic analysis of double mutants from the POP2 and PKC1 pathways suggested that the POP2 and the PKC1 pathways are independent but have some overlapping functions.

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Year:  1998        PMID: 9504907      PMCID: PMC1459828     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  36 in total

1.  DBF2, a cell cycle-regulated protein kinase, is physically and functionally associated with the CCR4 transcriptional regulatory complex.

Authors:  H Y Liu; J H Toyn; Y C Chiang; M P Draper; L H Johnston; C L Denis
Journal:  EMBO J       Date:  1997-09-01       Impact factor: 11.598

2.  Structure and molecular analysis of RGR1, a gene required for glucose repression of Saccharomyces cerevisiae.

Authors:  A Sakai; Y Shimizu; S Kondou; T Chibazakura; F Hishinuma
Journal:  Mol Cell Biol       Date:  1990-08       Impact factor: 4.272

3.  Staurosporine, a potent inhibitor of phospholipid/Ca++dependent protein kinase.

Authors:  T Tamaoki; H Nomoto; I Takahashi; Y Kato; M Morimoto; F Tomita
Journal:  Biochem Biophys Res Commun       Date:  1986-03-13       Impact factor: 3.575

4.  The CCR4 gene from Saccharomyces cerevisiae is required for both nonfermentative and spt-mediated gene expression.

Authors:  C L Denis; T Malvar
Journal:  Genetics       Date:  1990-02       Impact factor: 4.562

5.  One-step gene disruption in yeast.

Authors:  R J Rothstein
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

6.  PRP5: a helicase-like protein required for mRNA splicing in yeast.

Authors:  G Dalbadie-McFarland; J Abelson
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

7.  The CCR4 protein from Saccharomyces cerevisiae contains a leucine-rich repeat region which is required for its control of ADH2 gene expression.

Authors:  T Malvar; R W Biron; D B Kaback; C L Denis
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

8.  Transformation of intact yeast cells treated with alkali cations.

Authors:  H Ito; Y Fukuda; K Murata; A Kimura
Journal:  J Bacteriol       Date:  1983-01       Impact factor: 3.490

9.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

10.  Identification of new genes involved in the regulation of yeast alcohol dehydrogenase II.

Authors:  C L Denis
Journal:  Genetics       Date:  1984-12       Impact factor: 4.562

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  72 in total

1.  CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase.

Authors:  Junji Chen; Yueh-Chin Chiang; Clyde L Denis
Journal:  EMBO J       Date:  2002-03-15       Impact factor: 11.598

2.  Yak1p, a DYRK family kinase, translocates to the nucleus and phosphorylates yeast Pop2p in response to a glucose signal.

Authors:  H Moriya; Y Shimizu-Yoshida; A Omori; S Iwashita; M Katoh; A Sakai
Journal:  Genes Dev       Date:  2001-05-15       Impact factor: 11.361

3.  An essential role for the Saccharomyces cerevisiae DEAD-box helicase DHH1 in G1/S DNA-damage checkpoint recovery.

Authors:  Megan Bergkessel; Joseph C Reese
Journal:  Genetics       Date:  2004-05       Impact factor: 4.562

4.  Mating pheromone in Cryptococcus neoformans is regulated by a transcriptional/degradative "futile" cycle.

Authors:  Yoon-Dong Park; John Panepinto; Soowan Shin; Peter Larsen; Steven Giles; Peter R Williamson
Journal:  J Biol Chem       Date:  2010-08-27       Impact factor: 5.157

Review 5.  Investigating the function of CAF1 deadenylases during plant stress responses.

Authors:  Justin W Walley; Dior R Kelley; Tatyan Savchenko; Katayoon Dehesh
Journal:  Plant Signal Behav       Date:  2010-07-01

6.  Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity.

Authors:  Hui Wang; Masahiro Morita; Xiuna Yang; Toru Suzuki; Wen Yang; Jiao Wang; Kentaro Ito; Quan Wang; Cong Zhao; Mark Bartlam; Tadashi Yamamoto; Zihe Rao
Journal:  EMBO J       Date:  2010-07-13       Impact factor: 11.598

Review 7.  The structural basis for deadenylation by the CCR4-NOT complex.

Authors:  Mark Bartlam; Tadashi Yamamoto
Journal:  Protein Cell       Date:  2010-06-04       Impact factor: 14.870

8.  Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation.

Authors:  Claudia Temme; Lianbing Zhang; Elisabeth Kremmer; Christian Ihling; Aymeric Chartier; Andrea Sinz; Martine Simonelig; Elmar Wahle
Journal:  RNA       Date:  2010-05-26       Impact factor: 4.942

9.  hCAF1/CNOT7 regulates interferon signalling by targeting STAT1.

Authors:  Clément Chapat; Chloé Kolytcheff; Muriel Le Romancer; Didier Auboeuf; Pierre De La Grange; Kamel Chettab; Stéphanie Sentis; Laura Corbo
Journal:  EMBO J       Date:  2013-02-05       Impact factor: 11.598

10.  One-step affinity purification of the yeast ribosome and its associated proteins and mRNAs.

Authors:  Toshifumi Inada; Eric Winstall; Salvador Z Tarun; John R Yates; Dave Schieltz; Alan B Sachs
Journal:  RNA       Date:  2002-07       Impact factor: 4.942

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