Literature DB >> 9495758

Enzyme specificity of 2-nitrotoluene 2,3-dioxygenase from Pseudomonas sp. strain JS42 is determined by the C-terminal region of the alpha subunit of the oxygenase component.

J V Parales1, R E Parales, S M Resnick, D T Gibson.   

Abstract

Biotransformations with recombinant Escherichia coli expressing the genes encoding 2-nitrotoluene 2,3-dioxygenase (2NTDO) from Pseudomonas sp. strain JS42 demonstrated that 2NTDO catalyzes the dihydroxylation and/or monohydroxylation of a wide range of aromatic compounds. Extremely high nucleotide and deduced amino acid sequence identity exists between the components from 2NTDO and the corresponding components from 2,4-dinitrotoluene dioxygenase (2,4-DNTDO) from Burkholderia sp. strain DNT (formerly Pseudomonas sp. strain DNT). However, comparisons of the substrates oxidized by these dioxygenases show that they differ in substrate specificity, regiospecificity, and the enantiomeric composition of their oxidation products. Hybrid dioxygenases were constructed with the genes encoding 2NTDO and 2,4-DNTDO. Biotransformation experiments with these hybrid dioxygenases showed that the C-terminal region of the large subunit of the oxygenase component (ISP alpha) was responsible for the enzyme specificity differences observed between 2NTDO and 2,4-DNTDO. The small subunit of the terminal oxygenase component (ISP beta) was shown to play no role in determining the specificities of these dioxygenases.

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Year:  1998        PMID: 9495758      PMCID: PMC107007          DOI: 10.1128/JB.180.5.1194-1199.1998

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  26 in total

1.  A simple procedure for maximum yield of high-quality plasmid DNA.

Authors:  S Y Lee; S Rasheed
Journal:  Biotechniques       Date:  1990-12       Impact factor: 1.993

2.  Sequences of genes encoding naphthalene dioxygenase in Pseudomonas putida strains G7 and NCIB 9816-4.

Authors:  M J Simon; T D Osslund; R Saunders; B D Ensley; S Suggs; A Harcourt; W C Suen; D L Cruden; D T Gibson; G J Zylstra
Journal:  Gene       Date:  1993-05-15       Impact factor: 3.688

3.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

4.  Biodegradation of 2,4-dinitrotoluene by a Pseudomonas sp.

Authors:  R J Spanggord; J C Spain; S F Nishino; K E Mortelmans
Journal:  Appl Environ Microbiol       Date:  1991-11       Impact factor: 4.792

5.  Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases.

Authors:  E L Neidle; C Hartnett; L N Ornston; A Bairoch; M Rekik; S Harayama
Journal:  J Bacteriol       Date:  1991-09       Impact factor: 3.490

6.  Gene components responsible for discrete substrate specificity in the metabolism of biphenyl (bph operon) and toluene (tod operon).

Authors:  K Furukawa; J Hirose; A Suyama; T Zaiki; S Hayashida
Journal:  J Bacteriol       Date:  1993-08       Impact factor: 3.490

7.  A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes.

Authors:  S Tabor; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

8.  Cloning and characterization of Pseudomonas sp. strain DNT genes for 2,4-dinitrotoluene degradation.

Authors:  W C Suen; J C Spain
Journal:  J Bacteriol       Date:  1993-03       Impact factor: 3.490

9.  Potential ligands to the [2Fe-2S] Rieske cluster of the cytochrome bc1 complex of Rhodobacter capsulatus probed by site-directed mutagenesis.

Authors:  E Davidson; T Ohnishi; E Atta-Asafo-Adjei; F Daldal
Journal:  Biochemistry       Date:  1992-04-07       Impact factor: 3.162

Review 10.  Functional and evolutionary relationships among diverse oxygenases.

Authors:  S Harayama; M Kok; E L Neidle
Journal:  Annu Rev Microbiol       Date:  1992       Impact factor: 15.500

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  39 in total

1.  Substrate specificity of naphthalene dioxygenase: effect of specific amino acids at the active site of the enzyme.

Authors:  R E Parales; K Lee; S M Resnick; H Jiang; D J Lessner; D T Gibson
Journal:  J Bacteriol       Date:  2000-03       Impact factor: 3.490

Review 2.  The role of active-site residues in naphthalene dioxygenase.

Authors:  Rebecca E Parales
Journal:  J Ind Microbiol Biotechnol       Date:  2003-04-15       Impact factor: 3.346

Review 3.  Nitroaromatic compounds, from synthesis to biodegradation.

Authors:  Kou-San Ju; Rebecca E Parales
Journal:  Microbiol Mol Biol Rev       Date:  2010-06       Impact factor: 11.056

4.  Three types of taxis used in the response of Acidovorax sp. strain JS42 to 2-nitrotoluene.

Authors:  Christine A Rabinovitch-Deere; Rebecca E Parales
Journal:  Appl Environ Microbiol       Date:  2012-01-27       Impact factor: 4.792

5.  Similar enzymes, different structures: phthalate dioxygenase is an alpha3alpha3 stacked hexamer, not an alpha3beta3 trimer like "normal" Rieske oxygenases.

Authors:  Michael Tarasev; Catherine S Kaddis; Sheng Yin; Joseph A Loo; John Burgner; David P Ballou
Journal:  Arch Biochem Biophys       Date:  2007-07-14       Impact factor: 4.013

6.  The novel bacterial N-demethylase PdmAB is responsible for the initial step of N,N-dimethyl-substituted phenylurea herbicide degradation.

Authors:  Tao Gu; Chaoyang Zhou; Sebastian R Sørensen; Ji Zhang; Jian He; Peiwen Yu; Xin Yan; Shunpeng Li
Journal:  Appl Environ Microbiol       Date:  2013-10-11       Impact factor: 4.792

7.  Substrate specificities of hybrid naphthalene and 2,4-dinitrotoluene dioxygenase enzyme systems.

Authors:  R E Parales; M D Emig; N A Lynch; D T Gibson
Journal:  J Bacteriol       Date:  1998-05       Impact factor: 3.490

8.  Subtle difference between benzene and toluene dioxygenases of Pseudomonas putida.

Authors:  Claire Bagnéris; Richard Cammack; Jeremy R Mason
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

9.  Similarities between the antABC-encoded anthranilate dioxygenase and the benABC-encoded benzoate dioxygenase of Acinetobacter sp. strain ADP1.

Authors:  B M Bundy; A L Campbell; E L Neidle
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

10.  Identification of chlorobenzene dioxygenase sequence elements involved in dechlorination of 1,2,4,5-tetrachlorobenzene.

Authors:  S Beil; J R Mason; K N Timmis; D H Pieper
Journal:  J Bacteriol       Date:  1998-11       Impact factor: 3.490

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