Literature DB >> 9791099

Identification of chlorobenzene dioxygenase sequence elements involved in dechlorination of 1,2,4,5-tetrachlorobenzene.

S Beil1, J R Mason, K N Timmis, D H Pieper.   

Abstract

The TecA chlorobenzene dioxygenase and the TodCBA toluene dioxygenase exhibit substantial sequence similarity yet have different substrate specificities. Escherichia coli cells producing recombinant TecA enzyme dioxygenate and simultaneously eliminate a halogen substituent from 1,2,4,5-tetrachlorobenzene but show no activity toward benzene, whereas those producing TodCBA dioxygenate benzene but not tetrachlorobenzene. A hybrid TecA dioxygenase variant containing the large alpha-subunit of the TodCBA dioxygenase exhibited a TodCBA dioxygenase specificity. Acquisition of dehalogenase activity was achieved by replacement of specific todC1 alpha-subunit subsequences by equivalent sequences of the tecA1 alpha-subunit. Substrate transformation specificities and rates by E. coli resting cells expressing hybrid systems were analyzed by high-performance liquid chromatography. This allowed the identification of both a single amino acid and potentially interacting regions required for dechlorination of tetrachlorobenzene. Hybrids with extended substrate ranges were generated that exhibited activity toward both benzene and tetrachlorobenzene. The regions determining substrate specificity in (chloro)benzene dioxygenases appear to be different from those previously identified in biphenyl dioxygenases.

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Year:  1998        PMID: 9791099      PMCID: PMC107608     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  35 in total

1.  Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707.

Authors:  K Taira; J Hirose; S Hayashida; K Furukawa
Journal:  J Biol Chem       Date:  1992-03-05       Impact factor: 5.157

2.  Site-directed mutagenesis of conserved amino acids in the alpha subunit of toluene dioxygenase: potential mononuclear non-heme iron coordination sites.

Authors:  H Jiang; R E Parales; N A Lynch; D T Gibson
Journal:  J Bacteriol       Date:  1996-06       Impact factor: 3.490

3.  PCR-mediated recombination and mutagenesis. SOEing together tailor-made genes.

Authors:  R M Horton
Journal:  Mol Biotechnol       Date:  1995-04       Impact factor: 2.695

4.  Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2BADE genes and their expression in Escherichia coli.

Authors:  G J Zylstra; D T Gibson
Journal:  J Biol Chem       Date:  1989-09-05       Impact factor: 5.157

5.  Nucleotide sequencing and transcriptional mapping of the genes encoding biphenyl dioxygenase, a multicomponent polychlorinated-biphenyl-degrading enzyme in Pseudomonas strain LB400.

Authors:  B D Erickson; F J Mondello
Journal:  J Bacteriol       Date:  1992-05       Impact factor: 3.490

6.  Active site structure of Rieske-type proteins: electron nuclear double resonance studies of isotopically labeled phthalate dioxygenase from Pseudomonas cepacia and Rieske protein from Rhodobacter capsulatus and molecular modeling studies of a Rieske center.

Authors:  R J Gurbiel; P E Doan; G T Gassner; T J Macke; D A Case; T Ohnishi; J A Fee; D P Ballou; B M Hoffman
Journal:  Biochemistry       Date:  1996-06-18       Impact factor: 3.162

7.  Sequence and expression of the bpdC1C2BADE genes involved in the initial steps of biphenyl/chlorobiphenyl degradation by Rhodococcus sp. M5.

Authors:  Y Wang; J Garnon; D Labbé; H Bergeron; P C Lau
Journal:  Gene       Date:  1995-10-16       Impact factor: 3.688

8.  The broad substrate chlorobenzene dioxygenase and cis-chlorobenzene dihydrodiol dehydrogenase of Pseudomonas sp. strain P51 are linked evolutionarily to the enzymes for benzene and toluene degradation.

Authors:  C Werlen; H P Kohler; J R van der Meer
Journal:  J Biol Chem       Date:  1996-02-23       Impact factor: 5.157

9.  Substitution of the ISP alpha subunit of biphenyl dioxygenase from Pseudomonas results in a modification of the enzyme activity.

Authors:  H M Tan; C M Cheong
Journal:  Biochem Biophys Res Commun       Date:  1994-10-28       Impact factor: 3.575

10.  The evolutionary relationship of biphenyl dioxygenase from gram-positive Rhodococcus globerulus P6 to multicomponent dioxygenases from gram-negative bacteria.

Authors:  J A Asturias; E Díaz; K N Timmis
Journal:  Gene       Date:  1995-04-14       Impact factor: 3.688

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  24 in total

1.  Substrate specificity of naphthalene dioxygenase: effect of specific amino acids at the active site of the enzyme.

Authors:  R E Parales; K Lee; S M Resnick; H Jiang; D J Lessner; D T Gibson
Journal:  J Bacteriol       Date:  2000-03       Impact factor: 3.490

Review 2.  The role of active-site residues in naphthalene dioxygenase.

Authors:  Rebecca E Parales
Journal:  J Ind Microbiol Biotechnol       Date:  2003-04-15       Impact factor: 3.346

3.  Assessment of toluene/biphenyl dioxygenase gene diversity in benzene-polluted soils: links between benzene biodegradation and genes similar to those encoding isopropylbenzene dioxygenases.

Authors:  Robert Witzig; Howard Junca; Hans-Jürgen Hecht; Dietmar H Pieper
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

4.  A novel hydrolytic dehalogenase for the chlorinated aromatic compound chlorothalonil.

Authors:  Guangli Wang; Rong Li; Shunpeng Li; Jiandong Jiang
Journal:  J Bacteriol       Date:  2010-04-02       Impact factor: 3.490

5.  Molecular cloning, nucleotide sequence, and expression of genes encoding a polycyclic aromatic ring dioxygenase from Mycobacterium sp. strain PYR-1.

Authors:  A A Khan; R F Wang; W W Cao; D R Doerge; D Wennerstrom; C E Cerniglia
Journal:  Appl Environ Microbiol       Date:  2001-08       Impact factor: 4.792

6.  Selection for growth on 3-nitrotoluene by 2-nitrotoluene-utilizing Acidovorax sp. strain JS42 identifies nitroarene dioxygenases with altered specificities.

Authors:  Kristina M Mahan; Joseph T Penrod; Kou-San Ju; Natascia Al Kass; Watumesa A Tan; Richard Truong; Juanito V Parales; Rebecca E Parales
Journal:  Appl Environ Microbiol       Date:  2014-10-24       Impact factor: 4.792

7.  Engineering Burkholderia xenovorans LB400 BphA through Site-Directed Mutagenesis at Position 283.

Authors:  Junde Li; Jun Min; Yuan Wang; Weiwei Chen; Yachao Kong; Tianyu Guo; Jai Krishna Mahto; Michel Sylvestre; Xiaoke Hu
Journal:  Appl Environ Microbiol       Date:  2020-09-17       Impact factor: 4.792

8.  Key Residues for Catalytic Function and Metal Coordination in a Carotenoid Cleavage Dioxygenase.

Authors:  Xuewu Sui; Jianye Zhang; Marcin Golczak; Krzysztof Palczewski; Philip D Kiser
Journal:  J Biol Chem       Date:  2016-07-24       Impact factor: 5.157

9.  Characterization of hybrid toluate and benzoate dioxygenases.

Authors:  Yong Ge; Lindsay D Eltis
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

10.  Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system.

Authors:  Rosmarie Friemann; Kyoung Lee; Eric N Brown; David T Gibson; Hans Eklund; S Ramaswamy
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-12-18
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