Literature DB >> 9463391

Evidence for in vivo ribosome recycling, the fourth step in protein biosynthesis.

L Janosi1, S Mottagui-Tabar, L A Isaksson, Y Sekine, E Ohtsubo, S Zhang, S Goon, S Nelken, M Shuda, A Kaji.   

Abstract

Ribosome recycling factor (RRF) catalyzes the fourth step of protein synthesis in vitro: disassembly of the post-termination complex of ribosomes, mRNA and tRNA. We now report the first in vivo evidence of RRF function using 12 temperature-sensitive Escherichia coli mutants which we isolated in this study. At non-permissive temperatures, most of the ribosomes remain on mRNA, scan downstream from the termination codon, and re-initiate translation at various sites in all frames without the presence of an initiation codon. Re-initiation does not occur upstream from the termination codon nor beyond a downstream initiation signal. RRF inactivation was bacteriostatic in the growing phase and bactericidal during the transition between the stationary and growing phase, confirming the essential nature of the fourth step of protein synthesis in vivo.

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Year:  1998        PMID: 9463391      PMCID: PMC1170462          DOI: 10.1093/emboj/17.4.1141

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  41 in total

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Authors:  K Ogawa; A Kaji
Journal:  Eur J Biochem       Date:  1975-10-15

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Authors:  A V Fowler; I Zabin
Journal:  Proc Natl Acad Sci U S A       Date:  1977-04       Impact factor: 11.205

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Authors:  T Hashimoto-Gotoh; M Sekiguchi
Journal:  J Bacteriol       Date:  1977-08       Impact factor: 3.490

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Authors:  A Hirashima; A Kaji
Journal:  Biochemistry       Date:  1972-10-24       Impact factor: 3.162

5.  Role of elongation factor G and a protein factor on the release of ribosomes from messenger ribonucleic acid.

Authors:  A Hirashima; A Kaji
Journal:  J Biol Chem       Date:  1973-11-10       Impact factor: 5.157

6.  Factor dependent breakdown of polysomes.

Authors:  A Hirashima; A Kaji
Journal:  Biochem Biophys Res Commun       Date:  1970-11-25       Impact factor: 3.575

7.  Reinitiation of translation from the triplet next to the amber termination codon in the absence of ribosome-releasing factor.

Authors:  M Ryoji; R Berland; A Kaji
Journal:  Proc Natl Acad Sci U S A       Date:  1981-10       Impact factor: 11.205

8.  Further characterization of ribosome releasing factor and evidence that it prevents ribosomes from reading through a termination codon.

Authors:  M Ryoji; J W Karpen; A Kaji
Journal:  J Biol Chem       Date:  1981-06-10       Impact factor: 5.157

9.  A temperature sensitive mutant in Bacillus subtilis with an altered elongation factor G.

Authors:  Y Aharonowitz; E Z Ron
Journal:  Mol Gen Genet       Date:  1972

10.  Ribosome recycling factor (ribosome releasing factor) is essential for bacterial growth.

Authors:  L Janosi; I Shimizu; A Kaji
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

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  56 in total

Review 1.  mRNA surveillance in eukaryotes: kinetic proofreading of proper translation termination as assessed by mRNP domain organization?

Authors:  P Hilleren; R Parker
Journal:  RNA       Date:  1999-06       Impact factor: 4.942

2.  Crystal structure of the ribosome recycling factor from Escherichia coli.

Authors:  K K Kim; K Min; S W Suh
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

3.  More surprises in translation: initiation without the initiator tRNA.

Authors:  U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

Review 4.  Macromolecular mimicry.

Authors:  P Nissen; M Kjeldgaard; J Nyborg
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

5.  Kinetics of ribosomal pausing during programmed -1 translational frameshifting.

Authors:  J D Lopinski; J D Dinman; J A Bruenn
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

6.  Functional mapping of ribosome-contact sites in the ribosome recycling factor: a structural view from a tRNA mimic.

Authors:  T Fujiwara; K Ito; Y Nakamura
Journal:  RNA       Date:  2001-01       Impact factor: 4.942

7.  Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch.

Authors:  T Toyoda; O F Tin; K Ito; T Fujiwara; T Kumasaka; M Yamamoto; M B Garber; Y Nakamura
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

8.  Role of ribosome recycling factor (RRF) in translational coupling.

Authors:  Y Inokuchi; A Hirashima; Y Sekine; L Janosi; A Kaji
Journal:  EMBO J       Date:  2000-07-17       Impact factor: 11.598

9.  Multiple mechanisms for degradation of bacteriophage T4 soc mRNA.

Authors:  Toshie Kai; Tetsuro Yonesaki
Journal:  Genetics       Date:  2002-01       Impact factor: 4.562

10.  Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.

Authors:  Ning Gao; Andrey V Zavialov; Måns Ehrenberg; Joachim Frank
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

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