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Literature DB >> 9443958

tRNA genes and retroelements in the yeast genome.

Abstract

A survey of tRNA genes and retroelements (Ty) in the genome of the yeast Saccharomyces cerevisiae is presented. Aspects of genomic organization and evolution of these genetic entities and their interplay are discussed. Attention is also given to the relationship between tRNA gene multiplicity and codon selection in yeast and the role of Ty elements.

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Year: 1998 PMID： 9443958 PMCID： PMC147333 DOI： 10.1093/nar/26.3.689

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

58 in total

1. Different patterns of transposable elements in the vicinity of tRNA genes in yeast: a possible clue to transcriptional modulation.

Authors: P Nelböck; R Stucka; H Feldmann
Journal: Biol Chem Hoppe Seyler Date: 1985-11

2. Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting transfer RNAs.

Authors: T Ikemura
Journal: J Mol Biol Date: 1982-07-15 Impact factor: 5.469

3. Insertion of a repetitive element at the same position in the 5'-flanking regions of two dissimilar yeast tRNA genes.

Authors: S B Sandmeyer; M V Olson
Journal: Proc Natl Acad Sci U S A Date: 1982-12 Impact factor: 11.205

4. A 'hot-spot' for Ty transposition on the left arm of yeast chromosome III.

Authors: J R Warmington; R Anwar; C S Newlon; R B Waring; R W Davies; K J Indge; S G Oliver
Journal: Nucleic Acids Res Date: 1986-04-25 Impact factor: 16.971

5. Dimeric tRNA precursors in yeast.

Authors: O Schmidt; J Mao; R Ogden; J Beckmann; H Sakano; J Abelson; D Söll
Journal: Nature Date: 1980-10-23 Impact factor: 49.962

Review 6. Yeast retrotransposons and tRNAs.

Authors: D F Voytas; J D Boeke
Journal: Trends Genet Date: 1993-12 Impact factor: 11.639

7. Concerted evolution of tRNA genes: intergenic conversion among three unlinked serine tRNA genes in S. pombe.

Authors: H Amstutz; P Munz; W D Heyer; U Leupoid; J Kohli
Journal: Cell Date: 1985-04 Impact factor: 41.582

8. Consistent association between sigma elements and tRNA genes in yeast.

Authors: G M Brodeur; S B Sandmeyer; M V Olson
Journal: Proc Natl Acad Sci U S A Date: 1983-06 Impact factor: 11.205

9. Codon selection in yeast.

Authors: J L Bennetzen; B D Hall
Journal: J Biol Chem Date: 1982-03-25 Impact factor: 5.157

10. Ty1 and delta elements occur adjacent to several tRNA genes in yeast.

Authors: A Eigel; H Feldmann
Journal: EMBO J Date: 1982 Impact factor: 11.598

58 in total

1. Three conserved members of the RNase D family have unique and overlapping functions in the processing of 5S, 5.8S, U4, U5, RNase MRP and RNase P RNAs in yeast.

Authors: A van Hoof; P Lennertz; R Parker
Journal: EMBO J Date: 2000-03-15 Impact factor: 11.598

2. The peculiar architectural framework of tRNASec is fully recognized by yeast AspRS.

Authors: J Rudinger-Thirion; R Giegé
Journal: RNA Date: 1999-04 Impact factor: 4.942

Review 3. Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs.

Authors: H Beier; M Grimm
Journal: Nucleic Acids Res Date: 2001-12-01 Impact factor: 16.971

4. A novel method for finding tRNA genes.

Authors: Vickie Tsui; Tom Macke; David A Case
Journal: RNA Date: 2003-05 Impact factor: 4.942

5. tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.

Authors: Christian Marck; Henri Grosjean
Journal: RNA Date: 2002-10 Impact factor: 4.942

10. Tad1p, a yeast tRNA-specific adenosine deaminase, is related to the mammalian pre-mRNA editing enzymes ADAR1 and ADAR2.

Authors: A Gerber; H Grosjean; T Melcher; W Keller
Journal: EMBO J Date: 1998-08-17 Impact factor: 11.598