Literature DB >> 9436906

Effect of frameshift-inducing mutants of elongation factor 1alpha on programmed +1 frameshifting in yeast.

P J Farabaugh1, A Vimaladithan.   

Abstract

The translational apparatus very efficiently eliminates errors that would cause a spontaneous shift in frames. The probability of frameshifting can be increased dramatically by either cis or trans-acting factors. Programmed translational frameshift sites are cis-acting sequences that greatly increase the frequency of such errors, at least in part by causing a transient translational pause. Pausing during programmed +1 frameshifts occurs because of slow recognition of the codon following the last read in the normal frame. Frameshifting can also be elevated in strains carrying mutations in the homologous elongation factors EF-Tu in bacteria, and EF-1alpha in the yeast Saccharomyces cerevisiae. This phenotype implies that the factors contribute to frame maintenance. Because EF-Tu/EF-1alpha modulate the kinetics of decoding, it is possible that the frameshift suppressor forms of the factors transiently slow normal decoding, allowing spontaneous frameshifting to occur more efficiently, resulting in phenotypic suppression. We have used a set of frameshift reporter plasmids to test the effect of suppressor forms of EF-1alpha on constructs that differ widely in the efficiency with which they stimulate +1 shifting. When these results were compared to the effect of increased translational pausing, it was apparent that the mutations affecting EF-1alpha do not simply prolong the translational pause. Rather, they appear to generally increase the likelihood of frame errors, apparently by affecting the error correction mechanism of the ribosome.

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Year:  1998        PMID: 9436906      PMCID: PMC1369594     

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  31 in total

1.  Translational frameshifts induced by mutant species of the polypeptide chain elongation factor Tu of Escherichia coli.

Authors:  E Vijgenboom; L Bosch
Journal:  J Biol Chem       Date:  1989-08-05       Impact factor: 5.157

Review 2.  EFTu provides an internal kinetic standard for translational accuracy.

Authors:  R C Thompson
Journal:  Trends Biochem Sci       Date:  1988-03       Impact factor: 13.807

3.  Mutations in elongation factor EF-1 alpha affect the frequency of frameshifting and amino acid misincorporation in Saccharomyces cerevisiae.

Authors:  M G Sandbaken; M R Culbertson
Journal:  Genetics       Date:  1988-12       Impact factor: 4.562

4.  tRNA-tRNA interactions within cellular ribosomes.

Authors:  D Smith; M Yarus
Journal:  Proc Natl Acad Sci U S A       Date:  1989-06       Impact factor: 11.205

5.  Reading frame selection and transfer RNA anticodon loop stacking.

Authors:  J F Curran; M Yarus
Journal:  Science       Date:  1987-12-11       Impact factor: 47.728

6.  Mutations at U2555, a tRNA-protected base in 23S rRNA, affect translational fidelity.

Authors:  M O'Connor; A E Dahlberg
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-01       Impact factor: 11.205

7.  Low activity of -galactosidase in frameshift mutants of Escherichia coli.

Authors:  J F Atkins; D Elseviers; L Gorini
Journal:  Proc Natl Acad Sci U S A       Date:  1972-05       Impact factor: 11.205

8.  A second tRNA binding site on elongation factor Tu is induced while the factor is bound to the ribosome.

Authors:  J M Van Noort; B Kraal; L Bosch
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

9.  Genetic characterization of frameshift suppressors with new decoding properties.

Authors:  D Hughes; S Thompson; M O'Connor; T Tuohy; B P Nichols; J F Atkins
Journal:  J Bacteriol       Date:  1989-02       Impact factor: 3.490

10.  Mutants of elongation factor Tu promote ribosomal frameshifting and nonsense readthrough.

Authors:  D Hughes; J F Atkins; S Thompson
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

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  6 in total

1.  Translational suppressors and antisuppressors alter the efficiency of the Ty1 programmed translational frameshift.

Authors:  C L Burck; Y O Chernoff; R Liu; P J Farabaugh; S W Liebman
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

2.  Ribosomal protein L5 helps anchor peptidyl-tRNA to the P-site in Saccharomyces cerevisiae.

Authors:  A Meskauskas; J D Dinman
Journal:  RNA       Date:  2001-08       Impact factor: 4.942

Review 3.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

4.  Mutations in elongation factor 1beta, a guanine nucleotide exchange factor, enhance translational fidelity.

Authors:  A Carr-Schmid; L Valente; V I Loik; T Williams; L M Starita; T G Kinzy
Journal:  Mol Cell Biol       Date:  1999-08       Impact factor: 4.272

Review 5.  Regulation of mRNA Translation in Neurons-A Matter of Life and Death.

Authors:  Mridu Kapur; Caitlin E Monaghan; Susan L Ackerman
Journal:  Neuron       Date:  2017-11-01       Impact factor: 17.173

6.  Synthesis of a bacteriophage MB78 late protein by novel ribosomal frameshifting.

Authors:  V Kolla; M Chakravorty; B Pandey; S M Srinivasula; A Mukherjee; G Litwack
Journal:  Gene       Date:  2000-08-22       Impact factor: 3.688

  6 in total

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