Literature DB >> 8415679

Mutations at U2555, a tRNA-protected base in 23S rRNA, affect translational fidelity.

M O'Connor1, A E Dahlberg.   

Abstract

A plasmid carrying a mutation in the highly conserved base U2555 in Escherichia coli 23S rRNA was isolated by selecting for suppression of the -1 frameshift mutation trpE91. U2555 is normally protected in chemical footprinting experiments by the aminoacyl residue of A-site-bound tRNA. Substitution of U2555 by adenine or guanine (but not by cytosine) increased readthrough of all three stop codons and +1 and -1 frameshifting. These effects on translational fidelity demonstrate the importance of U2555 for selection of the correct tRNA at the ribosomal A site.

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Year:  1993        PMID: 8415679      PMCID: PMC47533          DOI: 10.1073/pnas.90.19.9214

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  A single base substitution in 16S ribosomal RNA suppresses streptomycin dependence and increases the frequency of translational errors.

Authors:  P N Allen; H F Noller
Journal:  Cell       Date:  1991-07-12       Impact factor: 41.582

2.  A compilation of large subunit (23S-like) ribosomal RNA sequences presented in a secondary structure format.

Authors:  R R Gutell; M N Schnare; M W Gray
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

Review 3.  Towards a genetic dissection of the basis of triplet decoding, and its natural subversion: programmed reading frame shifts and hops.

Authors:  J F Atkins; R B Weiss; S Thompson; R F Gesteland
Journal:  Annu Rev Genet       Date:  1991       Impact factor: 16.830

Review 4.  Ribosomal RNA and translation.

Authors:  H F Noller
Journal:  Annu Rev Biochem       Date:  1991       Impact factor: 23.643

5.  Mutations in 16S rRNA that affect UGA (stop codon)-directed translation termination.

Authors:  H U Göringer; K A Hijazi; E J Murgola; A E Dahlberg
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-01       Impact factor: 11.205

6.  A compilation of large subunit RNA sequences presented in a structural format.

Authors:  R R Gutell; G E Fox
Journal:  Nucleic Acids Res       Date:  1988       Impact factor: 16.971

7.  Antibiotic resistance mutations in ribosomal RNA genes of Escherichia coli.

Authors:  C D Sigmund; M Ettayebi; A Borden; E A Morgan
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

8.  Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites.

Authors:  D Moazed; H F Noller
Journal:  Cell       Date:  1989-05-19       Impact factor: 41.582

9.  Slippery runs, shifty stops, backward steps, and forward hops: -2, -1, +1, +2, +5, and +6 ribosomal frameshifting.

Authors:  R B Weiss; D M Dunn; J F Atkins; R F Gesteland
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1987

10.  E. coli ribosomes re-phase on retroviral frameshift signals at rates ranging from 2 to 50 percent.

Authors:  R B Weiss; D M Dunn; M Shuh; J F Atkins; R F Gesteland
Journal:  New Biol       Date:  1989-11
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  33 in total

1.  Posttranscriptional modifications in the A-loop of 23S rRNAs from selected archaea and eubacteria.

Authors:  M A Hansen; F Kirpekar; W Ritterbusch; B Vester
Journal:  RNA       Date:  2002-02       Impact factor: 4.942

2.  Escherichia coli cells bearing a ribosomal ambiguity mutation in rpsD have a mutator phenotype that correlates with increased mistranslation.

Authors:  Sergey Balashov; M Zafri Humayun
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

3.  Isolation of antibiotic resistance mutations in the rRNA by using an in vitro selection system.

Authors:  Luisa Cochella; Rachel Green
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-04       Impact factor: 11.205

4.  Mutations at the accommodation gate of the ribosome impair RF2-dependent translation termination.

Authors:  Dmitry E Burakovsky; Petr V Sergiev; Maria A Steblyanko; Andriy V Kubarenko; Andrey L Konevega; Alexey A Bogdanov; Marina V Rodnina; Olga A Dontsova
Journal:  RNA       Date:  2010-07-28       Impact factor: 4.942

5.  Translational defects in a mutant deficient in YajL, the bacterial homolog of the parkinsonism-associated protein DJ-1.

Authors:  Fatoum Kthiri; Valérie Gautier; Hai-Tuong Le; Marie-Françoise Prère; Olivier Fayet; Abderrahim Malki; Ahmed Landoulsi; Gilbert Richarme
Journal:  J Bacteriol       Date:  2010-10-01       Impact factor: 3.490

6.  Simulating movement of tRNA into the ribosome during decoding.

Authors:  Kevin Y Sanbonmatsu; Simpson Joseph; Chang-Shung Tung
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-25       Impact factor: 11.205

7.  Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation.

Authors:  Anthony R Cukras; Rachel Green
Journal:  J Mol Biol       Date:  2005-04-12       Impact factor: 5.469

Review 8.  Expanding the nucleotide repertoire of the ribosome with post-transcriptional modifications.

Authors:  Christine S Chow; Tek N Lamichhane; Santosh K Mahto
Journal:  ACS Chem Biol       Date:  2007-09-21       Impact factor: 5.100

9.  Protein folding by domain V of Escherichia coli 23S rRNA: specificity of RNA-protein interactions.

Authors:  Dibyendu Samanta; Debashis Mukhopadhyay; Saheli Chowdhury; Jaydip Ghosh; Saumen Pal; Arunima Basu; Arpita Bhattacharya; Anindita Das; Debasis Das; Chanchal DasGupta
Journal:  J Bacteriol       Date:  2008-02-29       Impact factor: 3.490

10.  Selection for intragenic suppressors of lethal 23S rRNA mutations in Escherichia coli identifies residues important for ribosome assembly and function.

Authors:  Michael O'Connor
Journal:  Mol Genet Genomics       Date:  2007-09-06       Impact factor: 3.291

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