Literature DB >> 9419234

On the RNA world: evidence in favor of an early ribonucleopeptide world.

M Di Giulio1.   

Abstract

A highly complex RNA world, as is sometimes presented in view of the widespread and diversified use of RNA enzymes, would have encountered many difficulties in passing to a world with catalysis mediated by proteins. These difficulties can be overcome by postulating a very early relationship between the nucleotide and the amino acid components. In particular, after asserting that some characteristics expressed by (nucleotide) coenzymes in catalysis are easier to understand if a close and early relationship between these coenzymes and amino acids is hypothesized, a model is presented for the origin of the enzyme-coenzyme complex. This model is essentially based on an intermediate formed by a tRNA-like molecule covalently linked to a polypeptide. The model attributes the majority of the catalytic role in the ribonucleoprotein world to the latter complex and thus it takes into account the birth of the key intermediate in the origin of protein synthesis-namely, peptidyl-tRNA, which would have otherwise been extremely difficult to select. The predictions of the model are discussed along with its robustness, using the data derived from the study of intermediary metabolism and those from molecular biology. Finally, the appearance of the genetic code in the late phase of the ribonucleopeptide world is discussed.

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Year:  1997        PMID: 9419234     DOI: 10.1007/pl00006261

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  20 in total

1.  Ala-His mediated peptide bond formation revisited.

Authors:  D C Larkin; S A Martinis; D J Roberts; G E Fox
Journal:  Orig Life Evol Biosph       Date:  2001-12       Impact factor: 1.950

Review 2.  The early phases of genetic code origin: conjectures on the evolution of coded catalysis.

Authors:  Massimo Di Giulio
Journal:  Orig Life Evol Biosph       Date:  2003-10       Impact factor: 1.950

3.  tRNA synthetase paralogs: evolutionary links in the transition from tRNA-dependent amino acid biosynthesis to de novo biosynthesis.

Authors:  Christopher Francklyn
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-11       Impact factor: 11.205

Review 4.  The protein invasion: a broad review on the origin of the translational system.

Authors:  David W Morgens
Journal:  J Mol Evol       Date:  2013-10-22       Impact factor: 2.395

5.  A Model for the Origin of the First mRNAs.

Authors:  Massimo Di Giulio
Journal:  J Mol Evol       Date:  2015-07-24       Impact factor: 2.395

6.  An Autotrophic Origin for the Coded Amino Acids is Concordant with the Coevolution Theory of the Genetic Code.

Authors:  Massimo Di Giulio
Journal:  J Mol Evol       Date:  2016-10-14       Impact factor: 2.395

7.  On how many fundamental kinds of cells are present on Earth: looking for phylogenetic traits that would allow the identification of the primary lines of descent.

Authors:  Massimo Di Giulio
Journal:  J Mol Evol       Date:  2014-06-12       Impact factor: 2.395

8.  Conformation specificity and arene binding in a peptide composed only of Lys, Ile, Ala and Gly.

Authors:  Fernando Diez-García; Irene Gómez-Pinto; Avijit Chakrabartty; Carlos González; Douglas V Laurents
Journal:  Eur Biophys J       Date:  2011-10-27       Impact factor: 1.733

9.  Emerging Frontiers in the Study of Molecular Evolution.

Authors:  David A Liberles; Belinda Chang; Kerry Geiler-Samerotte; Aaron Goldman; Jody Hey; Betül Kaçar; Michelle Meyer; William Murphy; David Posada; Andrew Storfer
Journal:  J Mol Evol       Date:  2020-04       Impact factor: 2.395

10.  Single nucleotide translation without ribosomes.

Authors:  Biswarup Jash; Peter Tremmel; Dejana Jovanovic; Clemens Richert
Journal:  Nat Chem       Date:  2021-07-26       Impact factor: 24.427

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