Literature DB >> 9399874

OOTFD (Object-Oriented Transcription Factors Database): an object-oriented successor to TFD.

D Ghosh1.   

Abstract

ooTFD (object-oriented Transcription Factors Database) is a successor to TFD (Transcription Factors Database). ooTFD contains information represented in TFD but also allows the representation of containment, composite, and interaction relationships between transcription factor polypeptides. ooTFD is designed to represent information about all transcription factors, both eukaryotic and prokaryotic, basal as well as regulatory factors, and multiprotein complexes as well as monomers. ooTFD and associated tools and services can be accessed at http://www.isbi.net/

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Substances：

Year:  1998        PMID： 9399874      PMCID： PMC147249          DOI： 10.1093/nar/26.1.360

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  4 in total

Review 1.  A relational database of transcription factors.

Authors:  D Ghosh
Journal:  Nucleic Acids Res       Date:  1990-04-11       Impact factor: 16.971

2.  The Nuclear Receptor Resource: a growing family.

Authors:  E Martinez; D D Moore; E Keller; D Pearce; J P Vanden Heuvel; V Robinson; B Gottlieb; P MacDonald; S Simons; E Sanchez; M Danielsen
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

3.  Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL.

Authors:  T Heinemeyer; E Wingender; I Reuter; H Hermjakob; A E Kel; O V Kel; E V Ignatieva; E A Ananko; O A Podkolodnaya; F A Kolpakov; N L Podkolodny; N A Kolchanov
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

4.  Profile analysis.

Authors:  M Gribskov
Journal:  Methods Mol Biol       Date:  1994
  4 in total
  2 in total

1.  Object-oriented transcription factors database (ooTFD).

Authors:  D Ghosh
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  Databases, models, and algorithms for functional genomics: a bioinformatics perspective.

Authors:  Gautam B Singh; Harkirat Singh
Journal:  Mol Biotechnol       Date:  2005-02       Impact factor: 2.695
  2 in total

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