Literature DB >> 9399832

The viroid and viroid-like RNA database.

D A Lafontaine1, S Mercure, V Poisson, J P Perreault.   

Abstract

The viroid and viroid-like RNA database is a compilation of all natural sequences published in journals or available from the GenBank and EMBL nucleotide sequence libraries. Several information regarding these RNA species such as the position of their self-catalytic domains and the open reading frame of the human hepatitits delta virus are provided. The database also includes a determination of the likely ancestral sequence of most species and a prediction of the most stable secondary structures of these sequences. This online database is available on the World Wide Web (http://www.callisto.si.usherb.ca/[symbol: see text]jpperra ). It should provide an excellent reference point for further phylogenetic and structure-function studies of these RNA species.

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Year:  1998        PMID: 9399832      PMCID: PMC147186          DOI: 10.1093/nar/26.1.190

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  2 in total

1.  Compilation and analysis of viroid and viroid-like RNA sequences.

Authors:  F Bussière; D Lafontaine; J P Perreault
Journal:  Nucleic Acids Res       Date:  1996-05-15       Impact factor: 16.971

2.  Update of the viroid and viroid-like sequence database: addition of a hepatitis delta virus RNA section.

Authors:  D Lafontaine; S Mercure; J P Perreault
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

  2 in total
  3 in total

1.  The database of the smallest known auto-replicable RNA species: viroids and viroid-like RNAs.

Authors:  M Pelchat; P Deschênes; J P Perreault
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  SubViral RNA: a database of the smallest known auto-replicable RNA species.

Authors:  Martin Pelchat; Lynda Rocheleau; Jonathan Perreault; Jean-Pierre Perreault
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

3.  ViroidDB: a database of viroids and viroid-like circular RNAs.

Authors:  Benjamin D Lee; Uri Neri; Caleb J Oh; Peter Simmonds; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 16.971

  3 in total

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