Literature DB >> 9016518

Update of the viroid and viroid-like sequence database: addition of a hepatitis delta virus RNA section.

D Lafontaine1, S Mercure, J P Perreault.   

Abstract

Recently, we developed and made available an online database that includes all the reported (to our knowledge) viroid and viroid-like RNA sequences [Bussire,F., Lafontaine,D. and Perreault,J.-P. (1996)Nucleic Acids Res.24, 1793-1798]. We report here an update of this catalogue which includes the addition of a new section devoted to human hepatitis delta virus (vHDV) sequences. This new section comprises all available vHDV sequences, irrespective of their completeness, which have been either published or were available from nucleic acid libraries. Additional structural characteristics of the vHDV genome, such as the positions of the self-catalytic domains, the antigen open reading frames, etc., are also included. The catalogue is available on the World Wide Web (see text) in a user-friendly form. It should provide an excellent reference point for further molecular studies of these small circular pathogenic RNAs.

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Year:  1997        PMID: 9016518      PMCID: PMC146369          DOI: 10.1093/nar/25.1.123

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  4 in total

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Authors:  B J Saville; R A Collins
Journal:  Cell       Date:  1990-05-18       Impact factor: 41.582

2.  Compilation and analysis of viroid and viroid-like RNA sequences.

Authors:  F Bussière; D Lafontaine; J P Perreault
Journal:  Nucleic Acids Res       Date:  1996-05-15       Impact factor: 16.971

Review 3.  The molecular biology of hepatitis delta virus.

Authors:  M M Lai
Journal:  Annu Rev Biochem       Date:  1995       Impact factor: 23.643

4.  A genotype of hepatitis D virus that occurs in northern South America.

Authors:  J L Casey; T L Brown; E J Colan; F S Wignall; J L Gerin
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-01       Impact factor: 11.205

  4 in total
  5 in total

1.  The database of the smallest known auto-replicable RNA species: viroids and viroid-like RNAs.

Authors:  M Pelchat; P Deschênes; J P Perreault
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Delta ribozyme benefits from a good stability in vitro that becomes outstanding in vivo.

Authors:  Dominique Lévesque; Sanaa Choufani; Jean-Pierre Perreault
Journal:  RNA       Date:  2002-04       Impact factor: 4.942

3.  SubViral RNA: a database of the smallest known auto-replicable RNA species.

Authors:  Martin Pelchat; Lynda Rocheleau; Jonathan Perreault; Jean-Pierre Perreault
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

4.  National center for biotechnology information viral genomes project.

Authors:  Yiming Bao; Scott Federhen; Detlef Leipe; Vyvy Pham; Sergei Resenchuk; Mikhail Rozanov; Roman Tatusov; Tatiana Tatusova
Journal:  J Virol       Date:  2004-07       Impact factor: 5.103

5.  The viroid and viroid-like RNA database.

Authors:  D A Lafontaine; S Mercure; V Poisson; J P Perreault
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

  5 in total

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