Literature DB >> 12520047

SubViral RNA: a database of the smallest known auto-replicable RNA species.

Martin Pelchat1, Lynda Rocheleau, Jonathan Perreault, Jean-Pierre Perreault.   

Abstract

We describe here the establishment of an online database containing a large number of sequences and related data on viroids, viroid-like RNAs and human hepatitis delta virus (vHDV) in a customizable and user-friendly format. This database is available on the World Wide Web at http://penelope.med.usherb.ca/subviral.

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Year:  2003        PMID： 12520047      PMCID： PMC165473          DOI： 10.1093/nar/gkg026

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  5 in total

1.  The database of the smallest known auto-replicable RNA species: viroids and viroid-like RNAs.

Authors:  M Pelchat; P Deschênes; J P Perreault
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  The viroid and viroid-like RNA database.

Authors:  D A Lafontaine; P Deschênes; F Bussière; V Poisson; J P Perreault
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

3.  Compilation and analysis of viroid and viroid-like RNA sequences.

Authors:  F Bussière; D Lafontaine; J P Perreault
Journal:  Nucleic Acids Res       Date:  1996-05-15       Impact factor: 16.971

4.  The viroid and viroid-like RNA database.

Authors:  D A Lafontaine; S Mercure; V Poisson; J P Perreault
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

5.  Update of the viroid and viroid-like sequence database: addition of a hepatitis delta virus RNA section.

Authors:  D Lafontaine; S Mercure; J P Perreault
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971
  5 in total
  8 in total

1.  Characterization of the RNA motif responsible for the specific interaction of potato spindle tuber viroid RNA (PSTVd) and the tomato protein Virp1.

Authors:  Mariyana Gozmanova; Michela Alessandra Denti; Ivan Nikiforov Minkov; Mina Tsagris; Martin Tabler
Journal:  Nucleic Acids Res       Date:  2003-10-01       Impact factor: 16.971

2.  National center for biotechnology information viral genomes project.

Authors:  Yiming Bao; Scott Federhen; Detlef Leipe; Vyvy Pham; Sergei Resenchuk; Mikhail Rozanov; Roman Tatusov; Tatiana Tatusova
Journal:  J Virol       Date:  2004-07       Impact factor: 5.103

3.  On the role of RNA silencing in the pathogenicity and evolution of viroids and viral satellites.

Authors:  Ming-Bo Wang; Xue-Yu Bian; Li-Min Wu; Li-Xia Liu; Neil A Smith; Daniel Isenegger; Rong-Mei Wu; Chikara Masuta; Vicki B Vance; John M Watson; Ali Rezaian; Elizabeth S Dennis; Peter M Waterhouse
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-20       Impact factor: 11.205

4.  Pistachio (Pistacia vera L.) is a new natural host of Hop stunt viroid.

Authors:  Amine Elleuch; Imen Hamdi; Olfa Ellouze; Mohamed Ghrab; Hatem Fkahfakh; Noureddine Drira
Journal:  Virus Genes       Date:  2013-06-18       Impact factor: 2.332

5.  Unbiased in vitro selection reveals the unique character of the self-cleaving antigenomic HDV RNA sequence.

Authors:  Atef Nehdi; Jean-Pierre Perreault
Journal:  Nucleic Acids Res       Date:  2006-01-23       Impact factor: 16.971

6.  VirGen: a comprehensive viral genome resource.

Authors:  Urmila Kulkarni-Kale; Shriram Bhosle; G Sunitha Manjari; A S Kolaskar
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

7.  The Subviral RNA Database: a toolbox for viroids, the hepatitis delta virus and satellite RNAs research.

Authors:  Lynda Rocheleau; Martin Pelchat
Journal:  BMC Microbiol       Date:  2006-03-06       Impact factor: 3.605

8.  Cultivated grapevines represent a symptomless reservoir for the transmission of hop stunt viroid to hop crops: 15 years of evolutionary analysis.

Authors:  Yoko Kawaguchi-Ito; Shi-Fang Li; Masaya Tagawa; Hiroyuki Araki; Masafumi Goshono; Shingen Yamamoto; Mayumi Tanaka; Masako Narita; Kazuaki Tanaka; Sheng-Xue Liu; Eishiro Shikata; Teruo Sano
Journal:  PLoS One       Date:  2009-12-24       Impact factor: 3.240
  8 in total

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