Literature DB >> 9376376

Ultraviolet resonance Raman examination of the light-induced protein structural changes in rhodopsin activation.

G G Kochendoerfer1, S Kaminaka, R A Mathies.   

Abstract

Ultraviolet resonance Raman (UVRR) spectra of rhodopsin and its metarhodopsin I and metarhodopsin II photointermediates have been obtained to examine the molecular mechanism of G-protein-coupled receptor activation. Spectra were acquired using a single-pass capillary flow technique in combination with a Littrow prism UV prefilter detection system. The UVRR difference spectra between rhodopsin and mearhodopsin I exhibit small differences assignalbe to tyrosine residues and no differences due to tryptophan. The UVRR difference spectra between rhodopsin and metarhodopsin II exhibit significant differences for vibrations of both tryptophan and tyrosine residues. Most importantly, there is and intensity decrease of the totally symmetric tryptophan modes at 759, 1008, and 1545 cm-1, an intensity decrease of the tryptophan W7 band at 1357 cm-1, and a frequency shift of the tryptophan W17 ban from 885 to 892 cm-1. These difference features are assigned to one or more tryptophan residues that reside in a hydrophobic, weakly hydrogen-bonding environment in rhodopsin and that are transferred to a less hydrophobic, non-hydrogen-bonding environment during rhodopsin activation. The available evidence suggests that Trp265 makes a dominant contribution to the tryptophan features in this difference spectrum. These results are interpreted with a model for rhodopsin activation in which retinal isomerization alters the interaction of Trp265 with the ionone ring of the retinal chromophore.

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Year:  1997        PMID: 9376376     DOI: 10.1021/bi971541c

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  The M intermediate of Pharaonis phoborhodopsin is photoactive.

Authors:  S P Balashov; M Sumi; N Kamo
Journal:  Biophys J       Date:  2000-06       Impact factor: 4.033

2.  Picosecond dynamics of G-protein coupled receptor activation in rhodopsin from time-resolved UV resonance Raman spectroscopy.

Authors:  Judy E Kim; Duohai Pan; Richard A Mathies
Journal:  Biochemistry       Date:  2003-05-13       Impact factor: 3.162

Review 3.  G protein-coupled receptor rhodopsin: a prospectus.

Authors:  Sławomir Filipek; Ronald E Stenkamp; David C Teller; Krzysztof Palczewski
Journal:  Annu Rev Physiol       Date:  2002-05-01       Impact factor: 19.318

4.  Perturbations of aromatic amino acids are associated with iron cluster assembly in ribonucleotide reductase.

Authors:  Adam R Offenbacher; Jun Chen; Bridgette A Barry
Journal:  J Am Chem Soc       Date:  2011-04-12       Impact factor: 15.419

5.  Electron crystallography reveals the structure of metarhodopsin I.

Authors:  Jonathan J Ruprecht; Thorsten Mielke; Reiner Vogel; Claudio Villa; Gebhard F X Schertler
Journal:  EMBO J       Date:  2004-08-26       Impact factor: 11.598

6.  Insights into Protein Structure and Dynamics by Ultraviolet and Visible Resonance Raman Spectroscopy.

Authors:  Ignacio López-Peña; Brian S Leigh; Diana E Schlamadinger; Judy E Kim
Journal:  Biochemistry       Date:  2015-07-29       Impact factor: 3.162

7.  (1)H and (13)C MAS NMR evidence for pronounced ligand-protein interactions involving the ionone ring of the retinylidene chromophore in rhodopsin.

Authors:  Alain F L Creemers; Suzanne Kiihne; Petra H M Bovee-Geurts; Willem J DeGrip; Johan Lugtenburg; Huub J M de Groot
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-01       Impact factor: 11.205

8.  SERS-based plasmonic nanobiosensing in single living cells.

Authors:  Jonathan P Scaffidi; Molly K Gregas; Victoria Seewaldt; Tuan Vo-Dinh
Journal:  Anal Bioanal Chem       Date:  2008-12-07       Impact factor: 4.142

Review 9.  Amino acid conservation and interactions in rhodopsin: probing receptor activation by NMR spectroscopy.

Authors:  Andreyah Pope; Markus Eilers; Philip J Reeves; Steven O Smith
Journal:  Biochim Biophys Acta       Date:  2013-10-29

10.  Ligand channel in pharmacologically stabilized rhodopsin.

Authors:  Daniel Mattle; Bernd Kuhn; Johannes Aebi; Marc Bedoucha; Demet Kekilli; Nathalie Grozinger; Andre Alker; Markus G Rudolph; Georg Schmid; Gebhard F X Schertler; Michael Hennig; Jörg Standfuss; Roger J P Dawson
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-19       Impact factor: 11.205

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