Literature DB >> 26219819

Insights into Protein Structure and Dynamics by Ultraviolet and Visible Resonance Raman Spectroscopy.

Ignacio López-Peña1, Brian S Leigh1, Diana E Schlamadinger1, Judy E Kim1.   

Abstract

Raman spectroscopy is a form of vibrational spectroscopy based on inelastic scattering of light. In resonance Raman spectroscopy, the wavelength of the incident light falls within an absorption band of a chromophore, and this overlap of excitation and absorption energy greatly enhances the Raman scattering efficiency of the absorbing species. The ability to probe vibrational spectra of select chromophores within a complex mixture of molecules makes resonance Raman spectroscopy an excellent tool for studies of biomolecules. In this Current Topic, we discuss the type of molecular insights obtained from steady-state and time-resolved resonance Raman studies of a prototypical photoactive protein, rhodopsin. We also review recent efforts in ultraviolet resonance Raman investigations of soluble and membrane-associated biomolecules, including integral membrane proteins and antimicrobial peptides. These examples illustrate that resonance Raman is a sensitive, selective, and practical method for studying the structures of biological molecules, and the molecular bonding, geometry, and environments of protein cofactors, the backbone, and side chains.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26219819      PMCID: PMC5092233          DOI: 10.1021/acs.biochem.5b00514

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  113 in total

Review 1.  Time-resolved biochemical crystallography: a mechanistic perspective.

Authors:  K Moffat
Journal:  Chem Rev       Date:  2001-06       Impact factor: 60.622

Review 2.  How proteins adapt to a membrane-water interface.

Authors:  J A Killian; G von Heijne
Journal:  Trends Biochem Sci       Date:  2000-09       Impact factor: 13.807

3.  Structural variations in the cross-beta core of amyloid beta fibrils revealed by deep UV resonance Raman spectroscopy.

Authors:  Ludmila A Popova; Ravindra Kodali; Ronald Wetzel; Igor K Lednev
Journal:  J Am Chem Soc       Date:  2010-05-12       Impact factor: 15.419

4.  The photochemistry of o-nitrobenzaldehyde as seen by femtosecond vibrational spectroscopy.

Authors:  Stefan Laimgruber; Wolfgang J Schreier; Tobias Schrader; Florian Koller; Wolfgang Zinth; Peter Gilch
Journal:  Angew Chem Int Ed Engl       Date:  2005-12-09       Impact factor: 15.336

5.  UV resonance Raman-selective amide vibrational enhancement: quantitative methodology for determining protein secondary structure.

Authors:  Z Chi; X G Chen; J S Holtz; S A Asher
Journal:  Biochemistry       Date:  1998-03-03       Impact factor: 3.162

6.  Activities of LL-37, a cathelin-associated antimicrobial peptide of human neutrophils.

Authors:  J Turner; Y Cho; N N Dinh; A J Waring; R I Lehrer
Journal:  Antimicrob Agents Chemother       Date:  1998-09       Impact factor: 5.191

7.  Near-UV circular dichroism and UV resonance Raman spectra of individual tryptophan residues in human hemoglobin and their changes upon the quaternary structure transition.

Authors:  Masako Nagai; Shigenori Nagatomo; Yukifumi Nagai; Kenichi Ohkubo; Kiyohiro Imai; Teizo Kitagawa
Journal:  Biochemistry       Date:  2012-07-19       Impact factor: 3.162

8.  Cu(I) recognition via cation-pi and methionine interactions in CusF.

Authors:  Yi Xue; Anna V Davis; Gurusamy Balakrishnan; Jay P Stasser; Benjamin M Staehlin; Pamela Focia; Thomas G Spiro; James E Penner-Hahn; Thomas V O'Halloran
Journal:  Nat Chem Biol       Date:  2007-12-23       Impact factor: 15.040

9.  Optical, EPR, and 1H NMR spectroscopy of serine-ligated [2Fe-2S] ferredoxins produced by site-directed mutagenesis of cysteine residues in recombinant Anabaena 7120 vegetative ferredoxin.

Authors:  H Cheng; B Xia; G H Reed; J L Markley
Journal:  Biochemistry       Date:  1994-03-22       Impact factor: 3.162

10.  Ultraviolet resonance Raman study of drug binding in dihydrofolate reductase, gyrase, and catechol O-methyltransferase.

Authors:  V W Couling; P Fischer; D Klenerman; W Huber
Journal:  Biophys J       Date:  1998-08       Impact factor: 4.033

View more
  3 in total

1.  UV Resonance Raman Spectroscopy as a Tool to Probe Membrane Protein Structure and Dynamics.

Authors:  DeeAnn K Asamoto; Judy E Kim
Journal:  Methods Mol Biol       Date:  2019

2.  UV Resonance Raman explores protein structural modification upon fibrillation and ligand interaction.

Authors:  Maria Pachetti; Francesco D'Amico; Lorella Pascolo; Stefania Pucciarelli; Alessandro Gessini; Pietro Parisse; Lisa Vaccari; Claudio Masciovecchio
Journal:  Biophys J       Date:  2021-08-30       Impact factor: 3.699

Review 3.  A critical review of recent trends, and a future perspective of optical spectroscopy as PAT in biopharmaceutical downstream processing.

Authors:  Laura Rolinger; Matthias Rüdt; Jürgen Hubbuch
Journal:  Anal Bioanal Chem       Date:  2020-03-07       Impact factor: 4.142

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.