Literature DB >> 9336451

Evidence that Snf-Swi controls chromatin structure over both the TATA and UAS regions of the SUC2 promoter in Saccharomyces cerevisiae.

L Wu1, F Winston.   

Abstract

The Snf-Swi complex of the yeast Saccharomyces cerevisiae has been shown to control gene expression by controlling chromatin structure. We have analyzed the promoter of the SUC2 gene, a gene strongly controlled by Snf-Swi, by a high resolution analysis of micrococcal nuclease digests. This analysis suggests that there are at least four nucleosomes positioned over the SUC2 TATA and UAS regions under conditions repressing SUC2 transcription. Under derepressing conditions this entire promoter region is much more sensitive to MNase digestion. Analysis of an snf2 Delta mutant demonstrates that even under derepressing conditions the SUC2 promoter is resistant to MNase digestion. Thus, the Snf-Swi complex appears to control chromatin structure over both the SUC2 TATA and UAS regions. The presence of nucleosomes over both promoter regions may explain the strong requirement of SUC2 for Snf-Swi function.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9336451      PMCID: PMC147028          DOI: 10.1093/nar/25.21.4230

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  13 in total

1.  Short repeated elements in the upstream regulatory region of the SUC2 gene of Saccharomyces cerevisiae.

Authors:  L Sarokin; M Carlson
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

2.  Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II.

Authors:  J L Workman; R G Roeder
Journal:  Cell       Date:  1987-11-20       Impact factor: 41.582

3.  A new class of histone H2A mutations in Saccharomyces cerevisiae causes specific transcriptional defects in vivo.

Authors:  J N Hirschhorn; A L Bortvin; S L Ricupero-Hovasse; F Winston
Journal:  Mol Cell Biol       Date:  1995-04       Impact factor: 4.272

4.  Molecular analysis of SNF2 and SNF5, genes required for expression of glucose-repressible genes in Saccharomyces cerevisiae.

Authors:  E Abrams; L Neigeborn; M Carlson
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

5.  Chromatin structure of the yeast SUC2 promoter in regulatory mutants.

Authors:  E Matallana; L Franco; J E Pérez-Ortín
Journal:  Mol Gen Genet       Date:  1992-02

6.  Facilitated binding of TATA-binding protein to nucleosomal DNA.

Authors:  A N Imbalzano; H Kwon; M R Green; R E Kingston
Journal:  Nature       Date:  1994-08-11       Impact factor: 49.962

7.  Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C.

Authors:  F Winston; C Dollard; S L Ricupero-Hovasse
Journal:  Yeast       Date:  1995-01       Impact factor: 3.239

8.  Evidence that SNF2/SWI2 and SNF5 activate transcription in yeast by altering chromatin structure.

Authors:  J N Hirschhorn; S A Brown; C D Clark; F Winston
Journal:  Genes Dev       Date:  1992-12       Impact factor: 11.361

9.  The chromatin structure at the promoter of a glyceraldehyde phosphate dehydrogenase gene from Saccharomyces cerevisiae reflects its functional state.

Authors:  B Pavlović; W Hörz
Journal:  Mol Cell Biol       Date:  1988-12       Impact factor: 4.272

Review 10.  The SWI-SNF complex: a chromatin remodeling machine?

Authors:  C L Peterson; J W Tamkun
Journal:  Trends Biochem Sci       Date:  1995-04       Impact factor: 13.807

View more
  27 in total

1.  Recruitment of the SWI-SNF chromatin remodeling complex as a mechanism of gene activation by the glucocorticoid receptor tau1 activation domain.

Authors:  A E Wallberg; K E Neely; A H Hassan; J A Gustafsson; J L Workman; A P Wright
Journal:  Mol Cell Biol       Date:  2000-03       Impact factor: 4.272

2.  In vivo chromatin remodeling by yeast ISWI homologs Isw1p and Isw2p.

Authors:  N A Kent; N Karabetsou; P K Politis; J Mellor
Journal:  Genes Dev       Date:  2001-03-01       Impact factor: 11.361

3.  DNase I digestion reveals alternating asymmetrical protection of the nucleosome by the higher order chromatin structure.

Authors:  D Z Staynov
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

4.  Roles of SWI/SNF and HATs throughout the dynamic transcription of a yeast glucose-repressible gene.

Authors:  Fuqiang Geng; Brehon C Laurent
Journal:  EMBO J       Date:  2003-12-18       Impact factor: 11.598

5.  The Swi/Snf chromatin remodeling complex is required for ribosomal DNA and telomeric silencing in Saccharomyces cerevisiae.

Authors:  Vardit Dror; Fred Winston
Journal:  Mol Cell Biol       Date:  2004-09       Impact factor: 4.272

Review 6.  ATP-dependent chromatin remodeling factors and DNA damage repair.

Authors:  Mary Ann Osley; Toyoko Tsukuda; Jac A Nickoloff
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

7.  Dispersed mutations in histone H3 that affect transcriptional repression and chromatin structure of the CHA1 promoter in Saccharomyces cerevisiae.

Authors:  Qiye He; Cailin Yu; Randall H Morse
Journal:  Eukaryot Cell       Date:  2008-07-25

8.  Mutations in both the structured domain and N-terminus of histone H2B bypass the requirement for Swi-Snf in yeast.

Authors:  J Recht; M A Osley
Journal:  EMBO J       Date:  1999-01-04       Impact factor: 11.598

9.  SWI-SNF complex participation in transcriptional activation at a step subsequent to activator binding.

Authors:  M P Ryan; R Jones; R H Morse
Journal:  Mol Cell Biol       Date:  1998-04       Impact factor: 4.272

10.  Sth1p, a Saccharomyces cerevisiae Snf2p/Swi2p homolog, is an essential ATPase in RSC and differs from Snf/Swi in its interactions with histones and chromatin-associated proteins.

Authors:  J Du; I Nasir; B K Benton; M P Kladde; B C Laurent
Journal:  Genetics       Date:  1998-11       Impact factor: 4.562

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.