Literature DB >> 14685262

Roles of SWI/SNF and HATs throughout the dynamic transcription of a yeast glucose-repressible gene.

Fuqiang Geng1, Brehon C Laurent.   

Abstract

Eucaryotic gene expression requires chromatin-remodeling activities. We show by time-course studies that transcriptional induction of the yeast glucose-regulated SUC2 gene is rapid and shows a striking biphasic pattern, the first phase of which is partly mediated by the general stress transcription factors Msn2p/Msn4p. The SWI/SNF ATP-dependent chromatin-remodeling complex associates with the promoter in a similar biphasic manner and is essential for both phases of transcription. Two different histone acetyltransferases, Gcn5p and Esa1p, enhance the binding of SWI/SNF to the promoter during early transcription and are required for optimal SUC2 induction. Gcn5p is recruited to SUC2 simultaneously with SWI/SNF, whereas Esa1p associates constitutively with the promoter. This study reveals an unusual transcription pattern of a metabolic gene and suggests a novel strategy by which distinct chromatin remodelers cooperate for the dynamic activation of transcription.

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Year:  2003        PMID: 14685262      PMCID: PMC1271673          DOI: 10.1038/sj.emboj.7600035

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  62 in total

1.  Acute glucose starvation activates the nuclear localization signal of a stress-specific yeast transcription factor.

Authors:  Wolfram Görner; Erich Durchschlag; Julia Wolf; Elizabeth L Brown; Gustav Ammerer; Helmut Ruis; Christoph Schüller
Journal:  EMBO J       Date:  2002-01-15       Impact factor: 11.598

2.  Coordination of PIC assembly and chromatin remodeling during differentiation-induced gene activation.

Authors:  Evi Soutoglou; Iannis Talianidis
Journal:  Science       Date:  2002-03-08       Impact factor: 47.728

Review 3.  Bromodomain: an acetyl-lysine binding domain.

Authors:  Lei Zeng; Ming Ming Zhou
Journal:  FEBS Lett       Date:  2002-02-20       Impact factor: 4.124

4.  Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin.

Authors:  N Suka; Y Suka; A A Carmen; J Wu; M Grunstein
Journal:  Mol Cell       Date:  2001-08       Impact factor: 17.970

Review 5.  Histone acetyltransferases.

Authors:  S Y Roth; J M Denu; C D Allis
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

6.  Convergence of the target of rapamycin and the Snf1 protein kinase pathways in the regulation of the subcellular localization of Msn2, a transcriptional activator of STRE (Stress Response Element)-regulated genes.

Authors:  Isabel Mayordomo; Francisco Estruch; Pascual Sanz
Journal:  J Biol Chem       Date:  2002-07-01       Impact factor: 5.157

7.  Expression of the SUC2 gene of Saccharomyces cerevisiae is induced by low levels of glucose.

Authors:  S Ozcan; L G Vallier; J S Flick; M Carlson; M Johnston
Journal:  Yeast       Date:  1997-02       Impact factor: 3.239

8.  Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes.

Authors:  Ahmed H Hassan; Philippe Prochasson; Kristen E Neely; Scott C Galasinski; Mark Chandy; Michael J Carrozza; Jerry L Workman
Journal:  Cell       Date:  2002-11-01       Impact factor: 41.582

9.  Hog1 kinase converts the Sko1-Cyc8-Tup1 repressor complex into an activator that recruits SAGA and SWI/SNF in response to osmotic stress.

Authors:  Markus Proft; Kevin Struhl
Journal:  Mol Cell       Date:  2002-06       Impact factor: 17.970

Review 10.  Ordered recruitment: gene-specific mechanism of transcription activation.

Authors:  Maria Pia Cosma
Journal:  Mol Cell       Date:  2002-08       Impact factor: 17.970

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  35 in total

1.  A role for Gcn5 in cardiomyocyte differentiation of rat mesenchymal stem cells.

Authors:  Li Li; Jing Zhu; Jie Tian; Xiaoyan Liu; Chuan Feng
Journal:  Mol Cell Biochem       Date:  2010-09-12       Impact factor: 3.396

2.  Corepressor-directed preacetylation of histone H3 in promoter chromatin primes rapid transcriptional switching of cell-type-specific genes in yeast.

Authors:  Alec M Desimone; Jeffrey D Laney
Journal:  Mol Cell Biol       Date:  2010-05-03       Impact factor: 4.272

3.  Distinct roles for the RSC and Swi/Snf ATP-dependent chromatin remodelers in DNA double-strand break repair.

Authors:  Bob Chai; Jian Huang; Bradley R Cairns; Brehon C Laurent
Journal:  Genes Dev       Date:  2005-07-15       Impact factor: 11.361

Review 4.  Mechanisms of ATP dependent chromatin remodeling.

Authors:  Vamsi K Gangaraju; Blaine Bartholomew
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

Review 5.  ATP-dependent chromatin remodeling factors and DNA damage repair.

Authors:  Mary Ann Osley; Toyoko Tsukuda; Jac A Nickoloff
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

6.  Simultaneous recruitment of coactivators by Gcn4p stimulates multiple steps of transcription in vivo.

Authors:  Chhabi K Govind; Sungpil Yoon; Hongfang Qiu; Sudha Govind; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

7.  Efg1-mediated recruitment of NuA4 to promoters is required for hypha-specific Swi/Snf binding and activation in Candida albicans.

Authors:  Yang Lu; Chang Su; Xuming Mao; Prashna Pala Raniga; Haoping Liu; Jiangye Chen
Journal:  Mol Biol Cell       Date:  2008-08-06       Impact factor: 4.138

8.  The Snf1 protein kinase and Sit4 protein phosphatase have opposing functions in regulating TATA-binding protein association with the Saccharomyces cerevisiae INO1 promoter.

Authors:  Margaret K Shirra; Sarah E Rogers; Diane E Alexander; Karen M Arndt
Journal:  Genetics       Date:  2005-02-16       Impact factor: 4.562

9.  The transcriptional coactivators SAGA, SWI/SNF, and mediator make distinct contributions to activation of glucose-repressed genes.

Authors:  Rhiannon K Biddick; G Lynn Law; Kevin Khaw Beng Chin; Elton T Young
Journal:  J Biol Chem       Date:  2008-09-30       Impact factor: 5.157

10.  NuA4 lysine acetyltransferase Esa1 is targeted to coding regions and stimulates transcription elongation with Gcn5.

Authors:  Daniel S Ginsburg; Chhabi K Govind; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2009-10-12       Impact factor: 4.272

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