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Literature DB >> 9278174

Foldback transposable elements in plants.

Abstract

A novel transposon family was discovered in plants. This family, designated SoFT (Solanaceae Foldback Transposon), exhibit striking structural similarity to the 'foldback' class of animal transposons. SoFT elements consist of a middle segment surrounded by long terminal inverted repeats. Two of the identified SoFT elements have 'classical' foldback structure: their inverted repeats are divided into two domains. The outer domain consists of tandemly arranged subrepeats, whereas the inner domain is non-repetitive and AT-rich. The existence of foldback elements in plants as well as in animals suggests that long inverted repeat (foldback) transposons are ubiquitous among eukaryotes.

Mesh：

Substances：

Year: 1997 PMID： 9278174 DOI： 10.1023/a:1005855008823

Source DB: PubMed Journal: Plant Mol Biol ISSN： 0167-4412 Impact factor: 4.076

18 in total

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13 in total

1. FARE, a new family of foldback transposons in Arabidopsis.

Authors: A J Windsor; C S Waddell
Journal: Genetics Date: 2000-12 Impact factor: 4.562

2. Zaba: a novel miniature transposable element present in genomes of legume plants.

Authors: J Macas; P Neumann; D Pozárková
Journal: Mol Genet Genomics Date: 2003-07-30 Impact factor: 3.291

3. RYS1, a foldback transposon, is activated by tissue culture and shows preferential insertion points into the rye genome.

Authors: E Alves; I Ballesteros; R Linacero; A M Vázquez
Journal: Theor Appl Genet Date: 2005-06-10 Impact factor: 5.699

4. Diverse DNA transposons in rotifers of the class Bdelloidea.

Authors: Irina R Arkhipova; Matthew Meselson
Journal: Proc Natl Acad Sci U S A Date: 2005-08-04 Impact factor: 11.205

5. Sequence and analysis of the tomato JOINTLESS locus.

Authors: L Mao; D Begum; S A Goff; R A Wing
Journal: Plant Physiol Date: 2001-07 Impact factor: 8.340

6. Molecular characterization of two natural hotspots in the Drosophila buzzatii genome induced by transposon insertions.

Authors: M Cáceres; M Puig; A Ruiz
Journal: Genome Res Date: 2001-08 Impact factor: 9.043

7. Natural history of transposition in the green alga Chlamydomonas reinhardtii: use of the AMT4 locus as an experimental system.

Authors: Kwang-Seo Kim; Sydney Kustu; William Inwood
Journal: Genetics Date: 2006-05-15 Impact factor: 4.562

8. Molecular characterization and chromosomal distribution of Galileo, Kepler and Newton, three foldback transposable elements of the Drosophila buzzatii species complex.

Authors: Ferran Casals; Mario Cáceres; Maura Helena Manfrin; Josefa González; Alfredo Ruiz
Journal: Genetics Date: 2005-02-03 Impact factor: 4.562

9. The Foldback-like element Galileo belongs to the P superfamily of DNA transposons and is widespread within the Drosophila genus.

Authors: Mar Marzo; Marta Puig; Alfredo Ruiz
Journal: Proc Natl Acad Sci U S A Date: 2008-02-19 Impact factor: 11.205

10. Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs.

Authors: Hanhui Kuang; Chellappan Padmanabhan; Feng Li; Ayako Kamei; Pudota B Bhaskar; Shu Ouyang; Jiming Jiang; C Robin Buell; Barbara Baker
Journal: Genome Res Date: 2008-11-26 Impact factor: 9.043