Literature DB >> 18287066

The Foldback-like element Galileo belongs to the P superfamily of DNA transposons and is widespread within the Drosophila genus.

Mar Marzo1, Marta Puig, Alfredo Ruiz.   

Abstract

Galileo is the only transposable element (TE) known to have generated natural chromosomal inversions in the genus Drosophila. It was discovered in Drosophila buzzatii and classified as a Foldback-like element because of its long, internally repetitive, terminal inverted repeats (TIRs) and lack of coding capacity. Here, we characterized a seemingly complete copy of Galileo from the D. buzzatii genome. It is 5,406 bp long, possesses 1,229-bp TIRs, and encodes a 912-aa transposase similar to those of the Drosophila melanogaster 1360 (Hoppel) and P elements. We also searched the recently available genome sequences of 12 Drosophila species for elements similar to Dbuz\Galileo by using bioinformatic tools. Galileo was found in six species (ananassae, willistoni, peudoobscura, persimilis, virilis, and mojavensis) from the two main lineages within the Drosophila genus. Our observations place Galileo within the P superfamily of cut-and-paste transposons and extend considerably its phylogenetic distribution. The interspecific distribution of Galileo indicates an ancient presence in the genus, but the phylogenetic tree built with the transposase amino acid sequences contrasts significantly with that of the species, indicating lineage sorting and/or horizontal transfer events. Our results also suggest that Foldback-like elements such as Galileo may evolve from DNA-based transposon ancestors by loss of the transposase gene and disproportionate elongation of TIRs.

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Year:  2008        PMID: 18287066      PMCID: PMC2268567          DOI: 10.1073/pnas.0712110105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  45 in total

1.  Generation of a widespread Drosophila inversion by a transposable element.

Authors:  M Cáceres; J M Ranz; A Barbadilla; M Long; A Ruiz
Journal:  Science       Date:  1999-07-16       Impact factor: 47.728

2.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

Review 3.  Modern thoughts on an ancyent marinere: function, evolution, regulation.

Authors:  D L Hartl; A R Lohe; E R Lozovskaya
Journal:  Annu Rev Genet       Date:  1997       Impact factor: 16.830

4.  Tissue specificity of Drosophila P element transposition is regulated at the level of mRNA splicing.

Authors:  F A Laski; D C Rio; G M Rubin
Journal:  Cell       Date:  1986-01-17       Impact factor: 41.582

5.  Hairpin elements, the first family of foldback transposons (FTs) in Arabidopsis thaliana.

Authors:  J Adé; F J Belzile
Journal:  Plant J       Date:  1999-09       Impact factor: 6.417

6.  Unexpected diversity and differential success of DNA transposons in four species of entamoeba protozoans.

Authors:  Ellen J Pritham; Cédric Feschotte; Susan R Wessler
Journal:  Mol Biol Evol       Date:  2005-05-18       Impact factor: 16.240

7.  Characterization of the FB-NOF transposable element of Drosophila melanogaster.

Authors:  N Harden; M Ashburner
Journal:  Genetics       Date:  1990-10       Impact factor: 4.562

8.  Eucaryotic transposable genetic elements with inverted terminal repeats.

Authors:  S Potter; M Truett; M Phillips; A Maher
Journal:  Cell       Date:  1980-07       Impact factor: 41.582

9.  An unusual transposon with long terminal inverted repeats in the sea urchin Strongylocentrotus purpuratus.

Authors:  D Liebermann; B Hoffman-Liebermann; J Weinthal; G Childs; R Maxson; A Mauron; S N Cohen; L Kedes
Journal:  Nature       Date:  1983 Nov 24-30       Impact factor: 49.962

Review 10.  Factors that affect the horizontal transfer of transposable elements.

Authors:  Joana C Silva; Elgion L Loreto; Jonathan B Clark
Journal:  Curr Issues Mol Biol       Date:  2004-01       Impact factor: 2.081

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  17 in total

1.  Phantom, a new subclass of Mutator DNA transposons found in insect viruses and widely distributed in animals.

Authors:  Claudia P Marquez; Ellen J Pritham
Journal:  Genetics       Date:  2010-05-10       Impact factor: 4.562

2.  Genetic variation of copia suppression in Drosophila melanogaster.

Authors:  W Vu; S Nuzhdin
Journal:  Heredity (Edinb)       Date:  2010-07-07       Impact factor: 3.821

Review 3.  Structural and functional liaisons between transposable elements and satellite DNAs.

Authors:  Nevenka Meštrović; Brankica Mravinac; Martina Pavlek; Tanja Vojvoda-Zeljko; Eva Šatović; Miroslav Plohl
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

4.  General survey of hAT transposon superfamily with highlight on hobo element in Drosophila.

Authors:  Véronique Ladevèze; Nicole Chaminade; Françoise Lemeunier; Georges Periquet; Sylvie Aulard
Journal:  Genetica       Date:  2012-10-31       Impact factor: 1.082

5.  Gene alterations at Drosophila inversion breakpoints provide prima facie evidence for natural selection as an explanation for rapid chromosomal evolution.

Authors:  Yolanda Guillén; Alfredo Ruiz
Journal:  BMC Genomics       Date:  2012-02-01       Impact factor: 3.969

6.  The transposon Galileo generates natural chromosomal inversions in Drosophila by ectopic recombination.

Authors:  Alejandra Delprat; Bàrbara Negre; Marta Puig; Alfredo Ruiz
Journal:  PLoS One       Date:  2009-11-18       Impact factor: 3.240

7.  Striking structural dynamism and nucleotide sequence variation of the transposon Galileo in the genome of Drosophila mojavensis.

Authors:  Mar Marzo; Xabier Bello; Marta Puig; Xulio Maside; Alfredo Ruiz
Journal:  Mob DNA       Date:  2013-02-04

8.  Evolution of Tom, 297, 17.6 and rover retrotransposons in Drosophilidae species.

Authors:  Newton Medeiros Vidal; Adriana Ludwig; Elgion Lucio Silva Loreto
Journal:  Mol Genet Genomics       Date:  2009-07-08       Impact factor: 3.291

9.  Identification of multiple binding sites for the THAP domain of the Galileo transposase in the long terminal inverted-repeats.

Authors:  Mar Marzo; Danxu Liu; Alfredo Ruiz; Ronald Chalmers
Journal:  Gene       Date:  2013-05-04       Impact factor: 3.688

10.  Cloning and sequencing of the breakpoint regions of inversion 5g fixed in Drosophila buzzatii.

Authors:  Olivia Prazeres da Costa; Josefa González; Alfredo Ruiz
Journal:  Chromosoma       Date:  2009-02-07       Impact factor: 4.316

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