Literature DB >> 9210399

Validation and steady-state analysis of a power-law model of purine metabolism in man.

R Curto1, E O Voit, A Sorribas, M Cascante.   

Abstract

The paper introduces a model of human purine metabolism in situ. Chosen from among several alternative system descriptions, the model is formulated as a Generalized Mass Action system within Biochemical Systems Theory and validated with analyses of steady-state and dynamic characteristics. Eigenvalue and sensitivity analyses indicate that the model has a stable and robust steady-state. The model quite accurately reproduces numerous biochemical and clinical observations in healthy subjects as well as in patients with disorders of purine metabolism. These results suggest that the model can be used to assess biochemical and clinical aspects of human purine metabolism. It provides a means of exploring effects of enzyme deficiencies and is a potential tool for identifying steps of the pathway that could be the target of therapeutical intervention. Numerous quantitative comparisons with data are given. The model can be used for biomathematical exploration of relationships between enzymic deficiencies and clinically manifested diseases.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9210399      PMCID: PMC1218491          DOI: 10.1042/bj3240761

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  90 in total

Review 1.  Cellular concentrations of enzymes and their substrates.

Authors:  K R Albe; M H Butler; B E Wright
Journal:  J Theor Biol       Date:  1990-03-22       Impact factor: 2.691

2.  Allosteric regulation of calf thymus ribonucleoside diphosphate reductase.

Authors:  S Eriksson; L Thelander; M Akerman
Journal:  Biochemistry       Date:  1979-07-10       Impact factor: 3.162

3.  Raised IMP-dehydrogenase activity in the erythrocytes of a case of purine nucleoside phosphorylase (PNP) deficiency.

Authors:  G Morgan; S Strobel; C Montero; J A Duley; P M Davies; H A Simmonds
Journal:  Adv Exp Med Biol       Date:  1991       Impact factor: 2.622

4.  Molecular analysis of hypoxanthine-guanine phosphoribosyltransferase deficiency in Japanese patients.

Authors:  S Fujimori; T Tagaya; N Yamaoka; N Kamatani; I Akaoka
Journal:  Adv Exp Med Biol       Date:  1991       Impact factor: 2.622

5.  A syndrome of megaloblastic anemia, immunodeficiency, and excessive nucleotide degradation.

Authors:  T Page; W L Nyhan; A L Yu; J Yu
Journal:  Adv Exp Med Biol       Date:  1991       Impact factor: 2.622

6.  A linear steady-state treatment of enzymatic chains. General properties, control and effector strength.

Authors:  R Heinrich; T A Rapoport
Journal:  Eur J Biochem       Date:  1974-02-15

7.  Adenine nucleotide metabolism of blood platelets. 3. Adenine phosphoribosyl transferase and nucleotide formation from exogenous adenine.

Authors:  H Holmsen; M C Rozenberg
Journal:  Biochim Biophys Acta       Date:  1968-04-22

8.  MIST: a user-friendly metabolic simulator.

Authors:  M Ehlde; G Zacchi
Journal:  Comput Appl Biosci       Date:  1995-04

9.  Supercomputer analysis of purine and pyrimidine metabolism leading to DNA synthesis.

Authors:  F Heinmets
Journal:  Cell Biophys       Date:  1989-06

10.  Purification and some properties of cytosol 5'-nucleotidase from rat liver.

Authors:  R Itoh
Journal:  Biochim Biophys Acta       Date:  1981-02-13
View more
  13 in total

1.  Strategies for Comparing Metabolic Profiles: Implications for the Inference of Biochemical Mechanisms from Metabolomics Data.

Authors:  Zhen Qi; Eberhard O Voit
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2016-07-07       Impact factor: 3.710

Review 2.  Biological systems modeling and analysis: a biomolecular technique of the twenty-first century.

Authors:  Gautam Goel; I-Chun Chou; Eberhard O Voit
Journal:  J Biomol Tech       Date:  2006-09

3.  Structural basis for substrate selectivity and nucleophilic substitution mechanisms in human adenine phosphoribosyltransferase catalyzed reaction.

Authors:  Mohammad Ozeir; Jessica Huyet; Marie-Claude Burgevin; Benoît Pinson; Françoise Chesney; Jean-Marc Remy; Abdul Rauf Siddiqi; Roland Lupoli; Grégory Pinon; Christelle Saint-Marc; Jean-François Gibert; Renaud Morales; Irène Ceballos-Picot; Robert Barouki; Bertrand Daignan-Fornier; Anne Olivier-Bandini; Franck Augé; Pierre Nioche
Journal:  J Biol Chem       Date:  2019-06-03       Impact factor: 5.157

4.  Metabolic modeling helps interpret transcriptomic changes during malaria.

Authors:  Yan Tang; Anuj Gupta; Swetha Garimalla; Mary R Galinski; Mark P Styczynski; Luis L Fonseca; Eberhard O Voit
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2017-10-22       Impact factor: 5.187

5.  Analysis of abnormalities in purine metabolism leading to gout and to neurological dysfunctions in man.

Authors:  R Curto; E O Voit; M Cascante
Journal:  Biochem J       Date:  1998-02-01       Impact factor: 3.857

6.  Inference of cancer mechanisms through computational systems analysis.

Authors:  Zhen Qi; Eberhard O Voit
Journal:  Mol Biosyst       Date:  2017-02-28

7.  Non-linearity of Metabolic Pathways Critically Influences the Choice of Machine Learning Model.

Authors:  Ophélie Lo-Thong-Viramoutou; Philippe Charton; Xavier F Cadet; Brigitte Grondin-Perez; Emma Saavedra; Cédric Damour; Frédéric Cadet
Journal:  Front Artif Intell       Date:  2022-06-10

Review 8.  Recent developments in parameter estimation and structure identification of biochemical and genomic systems.

Authors:  I-Chun Chou; Eberhard O Voit
Journal:  Math Biosci       Date:  2009-03-25       Impact factor: 2.144

9.  Identification of cancer mechanisms through computational systems modeling.

Authors:  Zhen Qi; Eberhard O Voit
Journal:  Transl Cancer Res       Date:  2014-06-01       Impact factor: 1.241

Review 10.  Drosophila provides rapid modeling of renal development, function, and disease.

Authors:  Julian A T Dow; Michael F Romero
Journal:  Am J Physiol Renal Physiol       Date:  2010-10-06
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.