Literature DB >> 9209060

Characterization of thiI, a new gene involved in thiazole biosynthesis in Salmonella typhimurium.

E Webb1, K Claas, D M Downs.   

Abstract

Thiamine pyrophosphate (TPP) is a required cofactor in Salmonella typhimurium that is generated de novo by the condensation of 4-amino-5-hydroxymethyl pyrimidine (HMP) pyrophosphate and 4-methyl-5-(beta-hydroxyethyl)-thiazole (THZ) monophosphate. The THZ and HMP moieties are independently synthesized, and labeling studies have demonstrated probable metabolic precursors to both. We present herein the initial characterization of thiI, a gene required for THZ synthesis. We show that thiI is a 1,449-bp open reading frame located at minute 9.65 on the S. typhimurium chromosome and that it encodes a 483-amino-acid protein with a predicted molecular mass of 55 kDa. Unlike genes in the thiamine biosynthetic operon at minute 90, thiI is not transcriptionally regulated by TPP.

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Year:  1997        PMID: 9209060      PMCID: PMC179266          DOI: 10.1128/jb.179.13.4399-4402.1997

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  20 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  The thiJ locus and its relation to phosphorylation of hydroxymethylpyrimidine in Escherichia coli.

Authors:  T Mizote; M Tsuda; T Nakazawa; H Nakayama
Journal:  Microbiology       Date:  1996-10       Impact factor: 2.777

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Authors:  N Imamura; H Nakayama
Journal:  Experientia       Date:  1981-12-15

4.  Cloning and characteristics of a positive regulatory gene, THI2 (PHO6), of thiamin biosynthesis in Saccharomyces cerevisiae.

Authors:  H Nishimura; Y Kawasaki; Y Kaneko; K Nosaka; A Iwashima
Journal:  FEBS Lett       Date:  1992-02-03       Impact factor: 4.124

5.  Conversion of 5-aminoimidazole ribotide to the pyrimidine of thiamin in enterobacteria: study of the pathway with specifically labeled samples of riboside.

Authors:  B Estramareix; S David
Journal:  Biochim Biophys Acta       Date:  1990-08-17

6.  A positive regulatory gene, THI3, is required for thiamine metabolism in Saccharomyces cerevisiae.

Authors:  H Nishimura; Y Kawasaki; Y Kaneko; K Nosaka; A Iwashima
Journal:  J Bacteriol       Date:  1992-07       Impact factor: 3.490

7.  The thiM locus and its relation to phosphorylation of hydroxyethylthiazole in Escherichia coli.

Authors:  T Mizote; H Nakayama
Journal:  J Bacteriol       Date:  1989-06       Impact factor: 3.490

8.  Determination of the metabolic origin of the sulfur atom in thiamin of Escherichia coli by mass spectrometry.

Authors:  E DeMoll; W Shive
Journal:  Biochem Biophys Res Commun       Date:  1985-10-15       Impact factor: 3.575

9.  thiK and thiL loci of Escherichia coli.

Authors:  N Imamura; H Nakayama
Journal:  J Bacteriol       Date:  1982-08       Impact factor: 3.490

10.  The control mechanism of thiamine biosynthesis a model for the study of control of converging pathways.

Authors:  P C Newell; R G Tucker
Journal:  Biochem J       Date:  1966-08       Impact factor: 3.857

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  26 in total

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2.  A method for prediction of the locations of linker regions within large multifunctional proteins, and application to a type I polyketide synthase.

Authors:  Daniel W Udwary; Matthew Merski; Craig A Townsend
Journal:  J Mol Biol       Date:  2002-10-25       Impact factor: 5.469

3.  Functional Analysis of Bacillus subtilis Genes Involved in the Biosynthesis of 4-Thiouridine in tRNA.

Authors:  Lauren J Rajakovich; John Tomlinson; Patricia C Dos Santos
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4.  Using genomic information to investigate the function of ThiI, an enzyme shared between thiamin and 4-thiouridine biosynthesis.

Authors:  E G Mueller; P M Palenchar
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

5.  Purification, crystallization and preliminary crystallographic analysis of the putative thiamine-biosynthesis protein PH1313 from Pyrococcus horikoshii OT3.

Authors:  Michihiro Sugahara; Satoko Murai; Mitsuaki Sugahara; Naoki Kunishima
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-12-22

6.  The danger of annotation by analogy: most "thiI" genes play no role in thiamine biosynthesis.

Authors:  Robert A Bender
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

7.  Identification of a gene involved in the generation of 4-thiouridine in tRNA.

Authors:  E G Mueller; C J Buck; P M Palenchar; L E Barnhart; J L Paulson
Journal:  Nucleic Acids Res       Date:  1998-06-01       Impact factor: 16.971

8.  A Brassica cDNA clone encoding a bifunctional hydroxymethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase involved in thiamin biosynthesis.

Authors:  Y S Kim; K Nosaka; D M Downs; J M Kwak; D Park; I K Chung; H G Nam
Journal:  Plant Mol Biol       Date:  1998-08       Impact factor: 4.076

9.  Biosynthesis of 4-thiouridine in tRNA in the methanogenic archaeon Methanococcus maripaludis.

Authors:  Yuchen Liu; Xiang Zhu; Akiyoshi Nakamura; Ron Orlando; Dieter Söll; William B Whitman
Journal:  J Biol Chem       Date:  2012-08-17       Impact factor: 5.157

10.  Mining regulatory 5'UTRs from cDNA deep sequencing datasets.

Authors:  Jonathan Livny; Matthew K Waldor
Journal:  Nucleic Acids Res       Date:  2009-12-07       Impact factor: 16.971

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