Literature DB >> 17183176

Purification, crystallization and preliminary crystallographic analysis of the putative thiamine-biosynthesis protein PH1313 from Pyrococcus horikoshii OT3.

Michihiro Sugahara1, Satoko Murai, Mitsuaki Sugahara, Naoki Kunishima.   

Abstract

The putative thiamine-biosynthesis protein PH1313 from Pyrococcus horikoshii OT3 has been overexpressed and purified. Crystallization was performed by the oil-microbatch method using 28%(v/v) 2-methyl-2,4-pentanediol as a precipitant at 291 K. A native X-ray diffraction data set at 1.9 A resolution and a single anomalous dispersion data set from a selenomethionine-derivative crystal at 2.1 A resolution were collected using synchrotron radiation at 100 K. The native crystal belongs to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 71.7, b = 71.2, c = 141.8 A.

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Year:  2006        PMID: 17183176      PMCID: PMC2330111          DOI: 10.1107/S1744309106054509

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  11 in total

Review 1.  [Development of high-throughput automatic protein crystallization and observation system].

Authors:  Mitsuaki Sugahara; Masashi Miyano
Journal:  Tanpakushitsu Kakusan Koso       Date:  2002-06

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Authors:  E G Mueller; P M Palenchar; C J Buck
Journal:  J Biol Chem       Date:  2001-07-06       Impact factor: 5.157

3.  Crystal structure of Bacillus anthracis ThiI, a tRNA-modifying enzyme containing the predicted RNA-binding THUMP domain.

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4.  Identification of a gene involved in the generation of 4-thiouridine in tRNA.

Authors:  E G Mueller; C J Buck; P M Palenchar; L E Barnhart; J L Paulson
Journal:  Nucleic Acids Res       Date:  1998-06-01       Impact factor: 16.971

5.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

Review 6.  Thiamin biosynthesis in prokaryotes.

Authors:  T P Begley; D M Downs; S E Ealick; F W McLafferty; A P Van Loon; S Taylor; N Campobasso; H J Chiu; C Kinsland; J J Reddick; J Xi
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7.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

8.  Thiamine biosynthesis in Escherichia coli: in vitro reconstitution of the thiazole synthase activity.

Authors:  Roberta Leonardi; Peter L Roach
Journal:  J Biol Chem       Date:  2004-02-02       Impact factor: 5.157

9.  Thiamin biosynthesis in Escherichia coli. Identification of ThiS thiocarboxylate as the immediate sulfur donor in the thiazole formation.

Authors:  S V Taylor; N L Kelleher; C Kinsland; H J Chiu; C A Costello; A D Backstrom; F W McLafferty; T P Begley
Journal:  J Biol Chem       Date:  1998-06-26       Impact factor: 5.157

10.  Substrate specificity for 4-thiouridine modification in Escherichia coli.

Authors:  Charles T Lauhon; Whitney M Erwin; Giangthy N Ton
Journal:  J Biol Chem       Date:  2004-03-22       Impact factor: 5.157

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  5 in total

1.  Purification, crystallization and preliminary crystallographic analysis of a 4-thiouridine synthetase-RNA complex.

Authors:  Peter Thomas Naumann; Charles T Lauhon; Ralf Ficner
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-03-28

2.  Expression, purification, crystallization and preliminary X-ray studies of the TAN1 orthologue from Methanothermobacter thermautotrophicus.

Authors:  Ana P G Silva; Robert T Byrne; Maria Chechik; Callum Smits; David G Waterman; Alfred A Antson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-10-31

Review 3.  The structural and biochemical foundations of thiamin biosynthesis.

Authors:  Christopher T Jurgenson; Tadhg P Begley; Steven E Ealick
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

4.  Biosynthesis of Thiamin Pyrophosphate.

Authors:  Christopher T Jurgenson; Steven E Ealick; Tadhg P Begley
Journal:  EcoSal Plus       Date:  2009-08

5.  Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification.

Authors:  Piotr Neumann; Kristina Lakomek; Peter-Thomas Naumann; Whitney M Erwin; Charles T Lauhon; Ralf Ficner
Journal:  Nucleic Acids Res       Date:  2014-04-05       Impact factor: 16.971

  5 in total

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