Literature DB >> 9169213

Relax, a flexible program for the back calculation of NOESY spectra based on complete-relaxation-matrix formalism.

A Görler1, H R Kalbitzer.   

Abstract

RELAX is a flexible program for the quantitative analysis of NOESY spectra. It allows the simultaneous application of different models describing the internal and overall motion of the molecule under investigation for individual spin pairs or groups of spins. A correction for anisotropy effects due to the deviation of the molecule from a spherical shape is calculated automatically from the trial structure. The program can deal with completely relaxed spectra as well as spectra recorded with a short relaxation delay. An execution-time-controlled splitting of the relaxation matrix reduces the computation time significantly without any loss of accuracy. This is especially important for large molecules or medium distance cutoffs.

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Year:  1997        PMID: 9169213     DOI: 10.1006/jmre.1996.1033

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  13 in total

1.  Determination of the populations and structures of multiple conformers in an ensemble from NMR data: multiple-copy refinement of nucleic acid structures using floating weights.

Authors:  A Görler; N B Ulyanov; T L James
Journal:  J Biomol NMR       Date:  2000-02       Impact factor: 2.835

2.  Overcoming the problems associated with poor spectra quality of the protein kinase Byr2 using residual dipolar couplings.

Authors:  W Gronwald; E Brunner; F Huber; M Wenzler; C Herrmann; H R Kalbitzer
Journal:  Protein Sci       Date:  2001-06       Impact factor: 6.725

3.  Automated assignment of NOESY NMR spectra using a knowledge based method (KNOWNOE).

Authors:  Wolfram Gronwald; Sherif Moussa; Ralph Elsner; Astrid Jung; Bernhard Ganslmeier; Jochen Trenner; Werner Kremer; Klaus-Peter Neidig; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2002-08       Impact factor: 2.835

4.  High-temperature solution NMR structure of TmCsp.

Authors:  Astrid Jung; Christian Bamann; Werner Kremer; Hans Robert Kalbitzer; Eike Brunner
Journal:  Protein Sci       Date:  2004-02       Impact factor: 6.725

5.  Improved simulation of NOESY spectra by RELAX-JT2 including effects of J-coupling, transverse relaxation and chemical shift anisotrophy.

Authors:  Andreas Ried; Wolfram Gronwald; Jochen M Trenner; Konrad Brunner; Klaus-Peter Neidig; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2004-10       Impact factor: 2.835

6.  AUREMOL-RFAC-3D, combination of R-factors and their use for automated quality assessment of protein solution structures.

Authors:  Wolfram Gronwald; Konrad Brunner; Renate Kirchhöfer; Jochen Trenner; Klaus-Peter Neidig; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2006-11-29       Impact factor: 2.835

7.  Chemical shift optimization in multidimensional NMR spectra by AUREMOL-SHIFTOPT.

Authors:  Kumaran Baskaran; Renate Kirchhöfer; Fritz Huber; Jochen Trenner; Konrad Brunner; Wolfram Gronwald; Klaus-Peter Neidig; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2009-02-21       Impact factor: 2.835

8.  A NOESY-HSQC simulation program, SPIRIT.

Authors:  L Zhu; H J Dyson; P E Wright
Journal:  J Biomol NMR       Date:  1998-01       Impact factor: 2.835

9.  RFAC, a program for automated NMR R-factor estimation.

Authors:  W Gronwald; R Kirchhöfer; A Görler; W Kremer; B Ganslmeier; K P Neidig; H R Kalbitzer
Journal:  J Biomol NMR       Date:  2000-06       Impact factor: 2.835

10.  Infrequent cavity-forming fluctuations in HPr from Staphylococcus carnosus revealed by pressure- and temperature-dependent tyrosine ring flips.

Authors:  Mineyuki Hattori; Hua Li; Hiroaki Yamada; Kazuyuki Akasaka; Wolfgang Hengstenberg; Wolfram Gronwald; Hans Robert Kalbitzer
Journal:  Protein Sci       Date:  2004-12       Impact factor: 6.725

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