Literature DB >> 14739320

High-temperature solution NMR structure of TmCsp.

Astrid Jung1, Christian Bamann, Werner Kremer, Hans Robert Kalbitzer, Eike Brunner.   

Abstract

Cold shock proteins (Csps) are assumed to play a central role in the regulation of gene expression under cold shock conditions. Acting as single-stranded nucleic acid-binding proteins, they trigger the translation process and are therefore involved in the compensation of the influence of low temperatures (cold shock) upon the cell metabolism. However, it is unknown so far how Csps are switched on and off as a function of temperature. The aim of the present study is the study of possible structural changes responsible for this switching process. (1)H-(15)N HSQC spectra recorded at different temperatures and chemical-shift analysis have indicated subtle conformational changes for the cold-shock protein from the hyperthermophilic bacterium Thermotoga maritima (TmCsp) when the temperature is elevated from 303 K to its physiological temperature (343 K). The three-dimensional structure of TmCsp was determined by nuclear magnetic resonance (NMR) spectroscopy at 343 K to obtain quantitative information concerning these structural changes. By use of residual dipolar couplings, the loss of NOE information at high temperature could be compensated successfully. Most pronounced conformational changes compared with room-temperature conditions are observed for amino acid residues closely neighbored to two characteristic beta-bulges and a well-defined loop region of the protein. Because the residues shown to be responsible for the interaction of TmCsp with single-stranded nucleic acids can almost exclusively be found within these regions, nucleic acid-binding activity might be down-regulated with increasing temperature by the described conformational changes.

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Year:  2004        PMID: 14739320      PMCID: PMC2286716          DOI: 10.1110/ps.03281604

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  44 in total

1.  Solution NMR structure of the cold-shock protein from the hyperthermophilic bacterium Thermotoga maritima.

Authors:  W Kremer; B Schuler; S Harrieder; M Geyer; W Gronwald; C Welker; R Jaenicke; H R Kalbitzer
Journal:  Eur J Biochem       Date:  2001-05

2.  Thermal stability and atomic-resolution crystal structure of the Bacillus caldolyticus cold shock protein.

Authors:  U Mueller; D Perl; F X Schmid; U Heinemann
Journal:  J Mol Biol       Date:  2000-04-07       Impact factor: 5.469

3.  Automated assignment of NOESY NMR spectra using a knowledge based method (KNOWNOE).

Authors:  Wolfram Gronwald; Sherif Moussa; Ralph Elsner; Astrid Jung; Bernhard Ganslmeier; Jochen Trenner; Werner Kremer; Klaus-Peter Neidig; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2002-08       Impact factor: 2.835

4.  Determination of residual dipolar couplings in homonuclear MOCCA-SIAM experiments.

Authors:  Andreas Möglich; Michael Wenzler; Frank Kramer; Steffen J Glaser; Eike Brunner
Journal:  J Biomol NMR       Date:  2002-07       Impact factor: 2.835

5.  Role of entropy in protein thermostability: folding kinetics of a hyperthermophilic cold shock protein at high temperatures using 19F NMR.

Authors:  Benjamin Schuler; Werner Kremer; Hans Robert Kalbitzer; Rainer Jaenicke
Journal:  Biochemistry       Date:  2002-10-01       Impact factor: 3.162

6.  Electrostatic stabilization of a thermophilic cold shock protein.

Authors:  D Perl; F X Schmid
Journal:  J Mol Biol       Date:  2001-10-19       Impact factor: 5.469

7.  Synthesis of macromolecules by Escherichia coli near the minimal temperature for growth.

Authors:  M K Shaw; J L Ingraham
Journal:  J Bacteriol       Date:  1967-07       Impact factor: 3.490

8.  RFAC, a program for automated NMR R-factor estimation.

Authors:  W Gronwald; R Kirchhöfer; A Görler; W Kremer; B Ganslmeier; K P Neidig; H R Kalbitzer
Journal:  J Biomol NMR       Date:  2000-06       Impact factor: 2.835

9.  The solution structure and DNA-binding properties of the cold-shock domain of the human Y-box protein YB-1.

Authors:  Cathelijne P A M Kloks; Christian A E M Spronk; Edwin Lasonder; Astrid Hoffmann; Geerten W Vuister; Stephan Grzesiek; Cornelis W Hilbers
Journal:  J Mol Biol       Date:  2002-02-15       Impact factor: 5.469

10.  Cloning, overexpression, purification, and physicochemical characterization of a cold shock protein homolog from the hyperthermophilic bacterium Thermotoga maritima.

Authors:  C Welker; G Böhm; H Schurig; R Jaenicke
Journal:  Protein Sci       Date:  1999-02       Impact factor: 6.725

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  7 in total

1.  Similarity and difference in the unfolding of thermophilic and mesophilic cold shock proteins studied by molecular dynamics simulations.

Authors:  Xiaoqin Huang; Huan-Xiang Zhou
Journal:  Biophys J       Date:  2006-07-14       Impact factor: 4.033

2.  Unusual dimerization of a BcCsp mutant leads to reduced conformational dynamics.

Authors:  Alonso I Carvajal; Gabriel Vallejos; Elizabeth A Komives; Víctor Castro-Fernández; Diego A Leonardo; Richard C Garratt; César A Ramírez-Sarmiento; Jorge Babul
Journal:  FEBS J       Date:  2017-05-21       Impact factor: 5.542

3.  Glutamine Hydrolysis by Imidazole Glycerol Phosphate Synthase Displays Temperature Dependent Allosteric Activation.

Authors:  George P Lisi; Allen A Currier; J Patrick Loria
Journal:  Front Mol Biosci       Date:  2018-02-06

Review 4.  A Practical Perspective on the Roles of Solution NMR Spectroscopy in Drug Discovery.

Authors:  Qingxin Li; CongBao Kang
Journal:  Molecules       Date:  2020-06-28       Impact factor: 4.411

Review 5.  Pleiotropic roles of cold shock proteins with special emphasis on unexplored cold shock protein member of Plasmodium falciparum.

Authors:  Ankita Behl; Vikash Kumar; Maxim Shevtsov; Shailja Singh
Journal:  Malar J       Date:  2020-10-27       Impact factor: 2.979

6.  RNA and DNA Binding Epitopes of the Cold Shock Protein TmCsp from the Hyperthermophile Thermotoga maritima.

Authors:  Konstanze von König; Norman Kachel; Hans Robert Kalbitzer; Werner Kremer
Journal:  Protein J       Date:  2020-10-22       Impact factor: 2.371

7.  NMR Structure and Biophysical Characterization of Thermophilic Single-Stranded DNA Binding Protein from Sulfolobus Solfataricus.

Authors:  Min June Yang; Jinwoo Kim; Yeongjoon Lee; Woonghee Lee; Chin-Ju Park
Journal:  Int J Mol Sci       Date:  2022-03-13       Impact factor: 6.208

  7 in total

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