Literature DB >> 9154990

Identification and characterization of (GA/CT)n-microsatellite loci from Quercus petraea.

H Steinkellner1, S Fluch, E Turetschek, C Lexer, R Streiff, A Kremer, K Burg, J Glössl.   

Abstract

In this study a size selected genomic library from Quercus petraea was screened for (GA/CT)n-microsatellite sequences. The resulting loci were analysed by PCR for their usefulness as molecular markers in Q. petraea and Q. robur. 17 out of 52 tested primer pairs resulted in the amplification of a polymorphic single-locus pattern. The number of alleles found per locus varied from 6 to 16. Combining the genetic variation observed for the characterized loci provides a unique genotype for all the individuals tested. Using intraspecific controlled crosses of Q. robur trees Mendelian inheritance could be shown for five loci.

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Year:  1997        PMID： 9154990     DOI： 10.1023/a:1005736722794

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN： 0167-4412            Impact factor:   4.076


  22 in total

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Authors:  R Condit; S P Hubbell
Journal:  Genome       Date:  1991-02       Impact factor: 2.166

2.  Microsatellite repeats in grapevine reveal DNA polymorphisms when analysed as sequence-tagged sites (STSs).

Authors:  M R Thomas; N S Scott
Journal:  Theor Appl Genet       Date:  1993-09       Impact factor: 5.699

3.  Characterization of microsatellite markers in eastern white pine.

Authors:  C S Echt; P May-Marquardt; M Hseih; R Zahorchak
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4.  Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics.

Authors:  M A Saghai Maroof; R M Biyashev; G P Yang; Q Zhang; R W Allard
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

5.  Allele frequencies at microsatellite loci: the stepwise mutation model revisited.

Authors:  A M Valdes; M Slatkin; N B Freimer
Journal:  Genetics       Date:  1993-03       Impact factor: 4.562

6.  The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates.

Authors:  U Lagercrantz; H Ellegren; L Andersson
Journal:  Nucleic Acids Res       Date:  1993-03-11       Impact factor: 16.971

7.  A polymorphic microsatellite marker from the tropical tree Dryobalanops lanceolata (Dipterocarpaceae).

Authors:  R Terauchi
Journal:  Jpn J Genet       Date:  1994-10

8.  Evolution and distribution of (GT)n repetitive sequences in mammalian genomes.

Authors:  R L Stallings; A F Ford; D Nelson; D C Torney; C E Hildebrand; R K Moyzis
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9.  Comparative analysis of microsatellite DNA polymorphism in landraces and cultivars of rice.

Authors:  G P Yang; M A Maroof; C G Xu; Q Zhang; R M Biyashev
Journal:  Mol Gen Genet       Date:  1994-10-28

10.  Survey of plant short tandem DNA repeats.

Authors:  Z Wang; J L Weber; G Zhong; S D Tanksley
Journal:  Theor Appl Genet       Date:  1994-04       Impact factor: 5.699
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  32 in total

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Authors:  T Barreneche; M Casasoli; K Russell; A Akkak; H Meddour; C Plomion; F Villani; A Kremer
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Journal:  Ann Bot       Date:  2007-04-04       Impact factor: 4.357

5.  Efficient mitigation of founder effects during the establishment of a leading-edge oak population.

Authors:  Arndt Hampe; Marie-Hélène Pemonge; Rémy J Petit
Journal:  Proc Biol Sci       Date:  2013-06-19       Impact factor: 5.349

6.  Utility of multilocus genotypes for taxon assignment in stands of closely related European white oaks from Switzerland.

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Journal:  Ann Bot       Date:  2008-09-05       Impact factor: 4.357

7.  Genome scanning for interspecific differentiation between two closely related oak species [Quercus robur L. and Q. petraea (Matt.) Liebl.].

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Journal:  Genetics       Date:  2004-11       Impact factor: 4.562

8.  High nuclear genetic diversity, high levels of outcrossing and low differentiation among remnant populations of Quercus petraea at the margin of its range in Ireland.

Authors:  Graham Muir; Andrew J Lowe; Colin C Fleming; Claus Vogl
Journal:  Ann Bot       Date:  2004-04-21       Impact factor: 4.357

9.  Exploring species limits in two closely related Chinese oaks.

Authors:  Yan-Fei Zeng; Wan-Jin Liao; Rémy J Petit; Da-Yong Zhang
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

10.  Patterns of contemporary hybridization inferred from paternity analysis in a four-oak-species forest.

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Journal:  BMC Evol Biol       Date:  2009-12-07       Impact factor: 3.260
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