Literature DB >> 12028761

Novel perspectives in wood certification and forensics: dry wood as a source of DNA.

Marie-France Deguilloux1, Marie-Hélène Pemonge, Rémy J Petit.   

Abstract

The importance of wood for human societies can hardly be understated. If dry wood were amenable to molecular genetic investigations, this could lead to major applications in wood forensics, certification, archaeology and palaeobotany. To evaluate the potential of wood for molecular genetic investigations, we have attempted to isolate and amplify, by PCR, DNA fragments of increasing size corresponding to all three plant genomes from different regions of 10 oak logs. Stringent procedures to avoid contamination with external DNA were used in order to demonstrate the authenticity of the fragments amplified. This authenticity was further confirmed by demonstrating genetic uniformity within each log using both nuclear and chloroplast microsatellites. For most wood samples DNA was degraded, and the sequences that gave the best results were those of small size and present in high copy number (chloroplast, mitochondrial, or repeated nuclear sequences). Both storage conditions and storage duration play a role in DNA conservation. Overall, this work demonstrates that molecular markers from all three plant genomes can be used for genetic analysis on dry oak wood, but outlines some limitations and the need for further evaluation of the potential of wood for DNA analysis.

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Year:  2002        PMID: 12028761      PMCID: PMC1690996          DOI: 10.1098/rspb.2002.1982

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  20 in total

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Authors:  S Dumolin-Lapègue; M H Pemonge; L Gielly; P Taberlet; R J Petit
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2.  Chloroplast DNA footprints of postglacial recolonization by oaks.

Authors:  R J Petit; E Pineau; B Demesure; R Bacilieri; A Ducousso; A Kremer
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

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5.  Postmortem stability of DNA.

Authors:  W Bär; A Kratzer; M Mächler; W Schmid
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Review 6.  Ancient and modern mitochondrial DNA sequences and the colonization of the Pacific.

Authors:  E Hagelberg
Journal:  Electrophoresis       Date:  1997-08       Impact factor: 3.535

7.  A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants.

Authors:  B Demesure; N Sodzi; R J Petit
Journal:  Mol Ecol       Date:  1995-02       Impact factor: 6.185

8.  Identification and characterization of (GA/CT)n-microsatellite loci from Quercus petraea.

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Journal:  Plant Mol Biol       Date:  1997-04       Impact factor: 4.076

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Authors:  J F Bailey; M B Richards; V A Macaulay; I B Colson; I T James; D G Bradley; R E Hedges; B C Sykes
Journal:  Proc Biol Sci       Date:  1996-11-22       Impact factor: 5.349

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  24 in total

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2.  Wood identification with PCR targeting noncoding chloroplast DNA.

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Journal:  Plant Mol Biol       Date:  2011-10-26       Impact factor: 4.076

3.  Use of DNA barcodes to identify flowering plants.

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4.  A strategy for developing high-resolution DNA barcodes for species discrimination of wood specimens using the complete chloroplast genome of three Pterocarpus species.

Authors:  Lichao Jiao; Yang Lu; Tuo He; Jianing Li; Yafang Yin
Journal:  Planta       Date:  2019-03-28       Impact factor: 4.116

5.  DNA extraction and amplification from contemporary Polynesian bark-cloth.

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6.  Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome.

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7.  Identification of Amazonian trees with DNA barcodes.

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Review 8.  Molecular genetic tools to infer the origin of forest plants and wood.

Authors:  Reiner Finkeldey; Ludger Leinemann; Oliver Gailing
Journal:  Appl Microbiol Biotechnol       Date:  2009-11-13       Impact factor: 4.813

9.  High-Throughput DNA sequencing of ancient wood.

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Journal:  Mol Ecol       Date:  2018-03-03       Impact factor: 6.185

10.  Taxonomic identification of mediterranean pines and their hybrids based on the high resolution melting (HRM) and trnL approaches: from cytoplasmic inheritance to timber tracing.

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Journal:  PLoS One       Date:  2013-04-05       Impact factor: 3.240

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