Literature DB >> 24194007

Microsatellite repeats in grapevine reveal DNA polymorphisms when analysed as sequence-tagged sites (STSs).

M R Thomas1, N S Scott.   

Abstract

Microsatellite repeat sequences were investigated as sequenced-tagged site (STS) DNA markers to determine the potential for genetic analysis of the grapevine genome. The PCR-generated markers detect codominant alleles at a single locus or site in the genome. The marker type is very informative detecting high heterozygosity (69%-88%) within individual grapevine cultivars and high genetic variation between cultivars, making it a useful marker type for plant genome mapping and genome typing. For five loci a screening of 26 V. vinifera cultivars found 13, 12, 8, 5, and 4 different length alleles respectively with some alleles more common than others. The genomic DNA sequences surrounding microsatellite sequences were conserved within the genus permitting STS primers to amplify STSs from other Vitis species. These Vitis species were found to have some unique alleles not present in V. vinifera.

Entities:  

Year:  1993        PMID： 24194007     DOI： 10.1007/BF00211051

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN： 0040-5752            Impact factor:   5.699


  20 in total

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Authors:  D J Kwiatkowski; E P Henske; K Weimer; L Ozelius; J F Gusella; J Haines
Journal:  Genomics       Date:  1992-02       Impact factor: 5.736

2.  Toward a unified approach to genetic mapping of eukaryotes based on sequence tagged microsatellite sites.

Authors:  J S Beckmann; M Soller
Journal:  Biotechnology (N Y)       Date:  1990-10

3.  Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups.

Authors:  A Edwards; H A Hammond; L Jin; C T Caskey; R Chakraborty
Journal:  Genomics       Date:  1992-02       Impact factor: 5.736

4.  Fingerprinting plant genomes with oligonucleotide probes specific for simple repetitive DNA sequences.

Authors:  B Beyermann; P Nürnberg; A Weihe; M Meixner; J T Epplen; T Börner
Journal:  Theor Appl Genet       Date:  1992-04       Impact factor: 5.699

5.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

6.  A common language for physical mapping of the human genome.

Authors:  M Olson; L Hood; C Cantor; D Botstein
Journal:  Science       Date:  1989-09-29       Impact factor: 47.728

7.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

8.  The conservation of dinucleotide microsatellites among mammalian genomes allows the use of heterologous PCR primer pairs in closely related species.

Authors:  S S Moore; L L Sargeant; T J King; J S Mattick; M Georges; D J Hetzel
Journal:  Genomics       Date:  1991-07       Impact factor: 5.736

9.  Evolution and distribution of (GT)n repetitive sequences in mammalian genomes.

Authors:  R L Stallings; A F Ford; D Nelson; D C Torney; C E Hildebrand; R K Moyzis
Journal:  Genomics       Date:  1991-07       Impact factor: 5.736

10.  Towards construction of a high resolution map of the mouse genome using PCR-analysed microsatellites.

Authors:  J M Love; A M Knight; M A McAleer; J A Todd
Journal:  Nucleic Acids Res       Date:  1990-07-25       Impact factor: 16.971
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  90 in total

1.  Molecular linkage maps of Vitis vinifera L. and Vitis riparia Mchx.

Authors:  M S Grando; D Bellin; K J Edwards; C Pozzi; M Stefanini; R Velasco
Journal:  Theor Appl Genet       Date:  2002-12-10       Impact factor: 5.699

2.  Evidence on the evolution of polymorphism of microsatellite markers in varieties of Vitis vinifera L.

Authors:  M Crespan
Journal:  Theor Appl Genet       Date:  2003-09-16       Impact factor: 5.699

3.  Evidence of a secondary grapevine domestication centre detected by SSR analysis.

Authors:  F Grassi; M Labra; S Imazio; A Spada; S Sgorbati; A Scienza; F Sala
Journal:  Theor Appl Genet       Date:  2003-09-16       Impact factor: 5.699

4.  Evidences for an alternative genealogy of 'Sangiovese'.

Authors:  Carlo Bergamini; Angelo Raffaele Caputo; Marica Gasparro; Rocco Perniola; Maria Francesca Cardone; Donato Antonacci
Journal:  Mol Biotechnol       Date:  2013-03       Impact factor: 2.695

5.  Rpv10: a new locus from the Asian Vitis gene pool for pyramiding downy mildew resistance loci in grapevine.

Authors:  Florian Schwander; Rudolf Eibach; Iris Fechter; Ludger Hausmann; Eva Zyprian; Reinhard Töpfer
Journal:  Theor Appl Genet       Date:  2011-09-21       Impact factor: 5.699

6.  Development of a standard set of microsatellite reference alleles for identification of grape cultivars.

Authors:  P This; A Jung; P Boccacci; J Borrego; R Botta; L Costantini; M Crespan; G S Dangl; C Eisenheld; F Ferreira-Monteiro; S Grando; J Ibáñez; T Lacombe; V Laucou; R Magalhães; C P Meredith; N Milani; E Peterlunger; F Regner; L Zulini; E Maul
Journal:  Theor Appl Genet       Date:  2004-09-30       Impact factor: 5.699

7.  Refined mapping of the Pierce's disease resistance locus, PdR1, and Sex on an extended genetic map of Vitis rupestris x V. arizonica.

Authors:  S Riaz; A F Krivanek; K Xu; M A Walker
Journal:  Theor Appl Genet       Date:  2006-09-08       Impact factor: 5.699

8.  An integrated SSR map of grapevine based on five mapping populations.

Authors:  A Doligez; A F Adam-Blondon; G Cipriani; G Di Gaspero; V Laucou; D Merdinoglu; C P Meredith; S Riaz; C Roux; P This
Journal:  Theor Appl Genet       Date:  2006-06-24       Impact factor: 5.699

9.  A grapevine (Vitis vinifera L.) genetic map integrating the position of 139 expressed genes.

Authors:  Marzia Salmaso; Giulia Malacarne; Michela Troggio; Giorgia Faes; Marco Stefanini; M Stella Grando; Riccardo Velasco
Journal:  Theor Appl Genet       Date:  2008-05       Impact factor: 5.699

10.  Development and transferability of apricot and grape EST microsatellite markers across taxa.

Authors:  V Decroocq; M G Favé; L Hagen; L Bordenave; S Decroocq
Journal:  Theor Appl Genet       Date:  2002-12-03       Impact factor: 5.699
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