Literature DB >> 9138553

Probing protein hydration and conformational states in solution.

C Reid1, R P Rand.   

Abstract

The addition of polyethylene glycol (PEG), of various molecular weights, to solutions bathing yeast hexokinase increases the affinity of the enzyme for its substrate glucose. The results can be interpreted on the basis that PEG acts directly on the protein or indirectly through water activity. The nature of the effects suggests to us that PEG's action is indirect. Interpretation of the results as an osmotic effect yields a decrease in the number of water molecules, delta Nw, associated with the glucose binding reaction. delta Nw is the difference in the number of PEG-inaccessible water molecules between the glucose-bound and glucose-free conformations of hexokinase. At low PEG concentrations, delta Nw increases from 50 to 326 with increasing MW of the PEG from 300 to 1000, and then remains constant for MW-PEG up to 10,000. This suggests that up to MW 1000, solutes of increasing size are excluded from ever larger aqueous compartments around the protein. Three hundred and twenty-six waters is larger than is estimated from modeling solvent volumes around the crystal structures of the two hexokinase conformations. For PEGs of MW > 1000, delta Nw falls from 326 to about 25 waters with increasing PEG concentration, i.e., PEG alone appears to "dehydrate" the unbound conformation of hexokinase in solution. Remarkably, the osmotic work of this dehydration would be on the order of only one k T per hexokinase molecule. We conclude that under thermal fluctuations, hexokinase in solution has a conformational flexibility that explores a wide range of hydration states not seen in the crystal structure.

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Year:  1997        PMID: 9138553      PMCID: PMC1184490          DOI: 10.1016/S0006-3495(97)78754-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  31 in total

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Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

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Journal:  J Mol Biol       Date:  1980-06-25       Impact factor: 5.469

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Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

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Journal:  Biochim Biophys Acta       Date:  1988-08-10

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Authors:  R E Viola; F M Raushel; A R Rendina; W W Cleland
Journal:  Biochemistry       Date:  1982-03-16       Impact factor: 3.162

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  29 in total

1.  Osmotic stress, crowding, preferential hydration, and binding: A comparison of perspectives.

Authors:  V A Parsegian; R P Rand; D C Rau
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

Review 2.  Osmosensing by bacteria: signals and membrane-based sensors.

Authors:  J M Wood
Journal:  Microbiol Mol Biol Rev       Date:  1999-03       Impact factor: 11.056

3.  Protein-solvent preferential interactions, protein hydration, and the modulation of biochemical reactions by solvent components.

Authors:  Serge N Timasheff
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-03       Impact factor: 11.205

4.  An alternative method to the osmotic stressing polymers: the osmomanometer.

Authors:  Eric Raspaud
Journal:  Eur Biophys J       Date:  2003-05-10       Impact factor: 1.733

5.  Estimating hydration changes upon biomolecular reactions from osmotic stress, high pressure, and preferential hydration experiments.

Authors:  Seishi Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-19       Impact factor: 11.205

6.  Scaling and mean-field theories applied to polymer brushes.

Authors:  Derek Marsh
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

7.  Thermal stability of glucokinase (GK) as influenced by the substrate glucose, an allosteric glucokinase activator drug (GKA) and the osmolytes glycerol and urea.

Authors:  B Zelent; C Buettger; J Grimsby; R Sarabu; J M Vanderkooi; A J Wand; F M Matschinsky
Journal:  Biochim Biophys Acta       Date:  2012-03-16

8.  Crowding Activates Heat Shock Protein 90.

Authors:  Jackson C Halpin; Bin Huang; Ming Sun; Timothy O Street
Journal:  J Biol Chem       Date:  2016-01-21       Impact factor: 5.157

9.  Solutes modify a conformational transition in a membrane transport protein.

Authors:  Miyeon Kim; Qi Xu; Gail E Fanucci; David S Cafiso
Journal:  Biophys J       Date:  2006-01-27       Impact factor: 4.033

10.  Cytoplasmic delivery of liposomal contents mediated by an acid-labile cholesterol-vinyl ether-PEG conjugate.

Authors:  Jeremy A Boomer; Marquita M Qualls; H Dorota Inerowicz; Robert H Haynes; V Srilakshmi Patri; Jong-Mok Kim; David H Thompson
Journal:  Bioconjug Chem       Date:  2009-01       Impact factor: 4.774

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