Literature DB >> 12097640

Protein-solvent preferential interactions, protein hydration, and the modulation of biochemical reactions by solvent components.

Serge N Timasheff1.   

Abstract

Solvent additives (cosolvents, osmolytes) modulate biochemical reactions if, during the course of the reaction, there is a change in preferential interactions of solvent components with the reacting system. Preferential interactions can be expressed in terms of preferential binding of the cosolvent or its preferential exclusion (preferential hydration). The driving force is the perturbation by the protein of the chemical potential of the cosolvent. It is shown that the measured change of the amount of water in contact with protein during the course of the reaction modulated by an osmolyte is a change in preferential hydration that is strictly a measure of the cosolvent chemical potential perturbation by the protein in the ternary water-protein-cosolvent system. It is not equal to the change in water of hydration, because water of hydration is a reflection strictly of protein-water forces in a binary system. There is no direct relation between water of preferential hydration and water of hydration.

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Year:  2002        PMID: 12097640      PMCID: PMC124992          DOI: 10.1073/pnas.122225399

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

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Authors:  S N Timasheff
Journal:  Biochemistry       Date:  1992-10-20       Impact factor: 3.162

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Authors:  N Poklar; S Lapanje
Journal:  Biophys Chem       Date:  1992-04       Impact factor: 2.352

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Authors:  S N Timasheff
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-23       Impact factor: 11.205

Review 4.  Analysis of effects of salts and uncharged solutes on protein and nucleic acid equilibria and processes: a practical guide to recognizing and interpreting polyelectrolyte effects, Hofmeister effects, and osmotic effects of salts.

Authors:  M T Record; W Zhang; C F Anderson
Journal:  Adv Protein Chem       Date:  1998

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Authors:  H Inoue; S N Timasheff
Journal:  Biopolymers       Date:  1972       Impact factor: 2.505

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Authors:  K C Aune; C Tanford
Journal:  Biochemistry       Date:  1969-11       Impact factor: 3.162

7.  The thermodynamics of solvent exchange.

Authors:  J A Schellman
Journal:  Biopolymers       Date:  1994-08       Impact factor: 2.505

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Authors:  E S Courtenay; M W Capp; C F Anderson; M T Record
Journal:  Biochemistry       Date:  2000-04-18       Impact factor: 3.162

9.  Interactions of myoglobin with urea and some alkylureas. I. Solvation in urea and alkylurea solutions.

Authors:  E Zerovnik; S Lapanje
Journal:  Biophys Chem       Date:  1986-06       Impact factor: 2.352

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Journal:  J Biol Chem       Date:  1981-07-25       Impact factor: 5.157

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  104 in total

1.  Estimating hydration changes upon biomolecular reactions from osmotic stress, high pressure, and preferential hydration experiments.

Authors:  Seishi Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-19       Impact factor: 11.205

2.  Sequence discrimination by DNA-binding domain of ETS family transcription factor PU.1 is linked to specific hydration of protein-DNA interface.

Authors:  Gregory M K Poon
Journal:  J Biol Chem       Date:  2012-04-02       Impact factor: 5.157

Review 3.  Allosteric modulators of steroid hormone receptors: structural dynamics and gene regulation.

Authors:  Raj Kumar; Iain J McEwan
Journal:  Endocr Rev       Date:  2012-03-20       Impact factor: 19.871

4.  Consistent picture of the reversible thermal unfolding of hen egg-white lysozyme from experiment and molecular dynamics.

Authors:  Filip Meersman; Canan Atilgan; Andrew J Miles; Reto Bader; Weifeng Shang; André Matagne; B A Wallace; Michel H J Koch
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

5.  Surface changes of the mechanosensitive channel MscS upon its activation, inactivation, and closing.

Authors:  Wojciech Grajkowski; Andrzej Kubalski; Piotr Koprowski
Journal:  Biophys J       Date:  2005-01-21       Impact factor: 4.033

6.  Displacement of adsorbed insulin by Tween 80 monitored using total internal reflection fluorescence and ellipsometry.

Authors:  S H Mollmann; U Elofsson; J T Bukrinsky; S Frokjaer
Journal:  Pharm Res       Date:  2005-08-16       Impact factor: 4.200

7.  A contribution to the theory of preferential interaction coefficients.

Authors:  J Michael Schurr; David P Rangel; Sergio R Aragon
Journal:  Biophys J       Date:  2005-07-29       Impact factor: 4.033

8.  Theory and Simulation of Multicomponent Osmotic Systems.

Authors:  Sadish Karunaweera; Moon Bae Gee; Samantha Weerasinghe; Paul E Smith
Journal:  J Chem Theory Comput       Date:  2012-10-09       Impact factor: 6.006

9.  Thermodynamic and structural basis for relaxation of specificity in protein-DNA recognition.

Authors:  Paul J Sapienza; Tianyi Niu; Michael R Kurpiewski; Arabela Grigorescu; Linda Jen-Jacobson
Journal:  J Mol Biol       Date:  2013-09-14       Impact factor: 5.469

10.  Residue-level interrogation of macromolecular crowding effects on protein stability.

Authors:  Lisa M Charlton; Christopher O Barnes; Conggang Li; Jillian Orans; Gregory B Young; Gary J Pielak
Journal:  J Am Chem Soc       Date:  2008-05-07       Impact factor: 15.419

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