Literature DB >> 9096312

Synthesis of functional eukaryotic ribosomal RNAs in trans: development of a novel in vivo rDNA system for dissecting ribosome biogenesis.

W Q Liang1, M J Fournier.   

Abstract

Active 18S and 25S ribosomal RNAs were produced in trans in yeast, from plasmids containing RNA polymerase II transcription signals and rDNA fragments with unique hybridization tags. Analyses were carried out in cells with temperature-sensitive RNA polymerase I. Functional rRNAs were derived from separate 18S and 5.8/25S rRNA coding units, however, active 25S rRNA could be produced only by cotranscription with 5.8S rRNA. The results demonstrate that the polycistronic organization of the large rDNA operon is not required for successful processing of rRNA or assembly of functional ribosomes. The split operon system should facilitate future efforts to dissect eukaryotic ribosome biogenesis.

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Year:  1997        PMID: 9096312      PMCID: PMC20288          DOI: 10.1073/pnas.94.7.2864

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Ribosomal precursor particles from yeast.

Authors:  J Trapman; J Retèl; R J Planta
Journal:  Exp Cell Res       Date:  1975-01       Impact factor: 3.905

Review 2.  The structure and biogenesis of yeast ribosomes.

Authors:  J L Woolford
Journal:  Adv Genet       Date:  1991       Impact factor: 1.944

Review 3.  Ribosome biogenesis in yeast.

Authors:  H A Raué; R J Planta
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1991

4.  Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiae.

Authors:  H D Li; J Zagorski; M J Fournier
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

Review 5.  Processing of pre-ribosomal RNA in Saccharomyces cerevisiae.

Authors:  J Venema; D Tollervey
Journal:  Yeast       Date:  1995-12       Impact factor: 3.239

6.  Unique organization of Leptospira interrogans rRNA genes.

Authors:  M Fukunaga; I Mifuchi
Journal:  J Bacteriol       Date:  1989-11       Impact factor: 3.490

7.  Synthesis of large rRNAs by RNA polymerase II in mutants of Saccharomyces cerevisiae defective in RNA polymerase I.

Authors:  Y Nogi; R Yano; M Nomura
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

8.  A system for the analysis of yeast ribosomal DNA mutations.

Authors:  W Musters; J Venema; G van der Linden; H van Heerikhuizen; J Klootwijk; R J Planta
Journal:  Mol Cell Biol       Date:  1989-02       Impact factor: 4.272

Review 9.  Synthesis of ribosomes in Saccharomyces cerevisiae.

Authors:  J R Warner
Journal:  Microbiol Rev       Date:  1989-06

10.  Depletion of U3 small nucleolar RNA inhibits cleavage in the 5' external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA.

Authors:  J M Hughes; M Ares
Journal:  EMBO J       Date:  1991-12       Impact factor: 11.598

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  24 in total

1.  The pre-ribosomal network.

Authors:  Philipp Milkereit; Holger Kühn; Nicole Gas; Herbert Tschochner
Journal:  Nucleic Acids Res       Date:  2003-02-01       Impact factor: 16.971

2.  Dbp7p, a putative ATP-dependent RNA helicase from Saccharomyces cerevisiae, is required for 60S ribosomal subunit assembly.

Authors:  M C Daugeron; P Linder
Journal:  RNA       Date:  1998-05       Impact factor: 4.942

3.  Nob1 binds the single-stranded cleavage site D at the 3'-end of 18S rRNA with its PIN domain.

Authors:  Allison C Lamanna; Katrin Karbstein
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-14       Impact factor: 11.205

4.  Structural equivalence in the transcribed spacers of pre-rRNA transcripts in Schizosaccharomyces pombe.

Authors:  A I Lalev; R N Nazar
Journal:  Nucleic Acids Res       Date:  1999-08-01       Impact factor: 16.971

5.  I-PpoI, the endonuclease encoded by the group I intron PpLSU3, is expressed from an RNA polymerase I transcript.

Authors:  J Lin; V M Vogt
Journal:  Mol Cell Biol       Date:  1998-10       Impact factor: 4.272

Review 6.  The small subunit processome in ribosome biogenesis—progress and prospects.

Authors:  Kathleen R Phipps; J Michael Charette; Susan J Baserga
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Jan-Feb       Impact factor: 9.957

7.  The Reb1-homologue Ydr026c/Nsi1 is required for efficient RNA polymerase I termination in yeast.

Authors:  Alarich Reiter; Stephan Hamperl; Hannah Seitz; Philipp Merkl; Jorge Perez-Fernandez; Lydia Williams; Jochen Gerber; Attila Németh; Isabelle Léger; Olivier Gadal; Philipp Milkereit; Joachim Griesenbeck; Herbert Tschochner
Journal:  EMBO J       Date:  2012-07-17       Impact factor: 11.598

8.  All three functional domains of the large ribosomal subunit protein L25 are required for both early and late pre-rRNA processing steps in Saccharomyces cerevisiae.

Authors:  C A van Beekvelt; M de Graaff-Vincent; A W Faber; J van't Riet; J Venema; H A Raué
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

9.  Identification of cis-acting elements involved in 3'-end formation of Saccharomyces cerevisiae 18S rRNA.

Authors:  C A van Beekvelt; R E Jeeninga; J van't Riet; J Venema; H A Raué
Journal:  RNA       Date:  2001-06       Impact factor: 4.942

10.  Deletions in the S1 domain of Rrp5p cause processing at a novel site in ITS1 of yeast pre-rRNA that depends on Rex4p.

Authors:  Noor A Eppens; Alex W Faber; Mariska Rondaij; Roshan S Jahangir; Saskia van Hemert; Jan C Vos; Jaap Venema; Hendrik A Raué
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

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