Literature DB >> 9080201

Speeding up protein folding: mutations that increase the rate at which Rop folds and unfolds by over four orders of magnitude.

M Munson1, K S Anderson, L Regan.   

Abstract

BACKGROUND: The dimeric four-helix-bundle protein Rop folds and unfolds extremely slowly. To understand the molecular basis for the slow kinetics, we have studied the folding and unfolding of wild-type Rop and a series of hydrophobic core mutants.
RESULTS: Mutation of the hydrophobic core creates stable, dimeric, and wild-type-like proteins with dramatically increased rates of both folding and unfolding. The increases in rates are dependent upon the number and position of repacked residues within the hydrophobic core.
CONCLUSIONS: Rop folds by a rapid collision of monomers to form a dimeric intermediate with substantial helical content, followed by a slow rearrangement to the final native structure. Rop unfolding is a single extremely slow kinetic phase. The slow steps of both folding and unfolding are dramatically increased by hydrophobic core replacements, suggesting that their main effect is to substantially decrease the energy of the transition state.

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Year:  1997        PMID: 9080201     DOI: 10.1016/S1359-0278(97)00008-4

Source DB:  PubMed          Journal:  Fold Des        ISSN: 1359-0278


  9 in total

1.  Energetics and mechanisms of folding and flipping the myristoyl switch in the {beta}-trefoil protein, hisactophilin.

Authors:  Martin T J Smith; Joseph Meissner; Samantha Esmonde; Hannah J Wong; Elizabeth M Meiering
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-19       Impact factor: 11.205

2.  Symmetry and frustration in protein energy landscapes: a near degeneracy resolves the Rop dimer-folding mystery.

Authors:  Yaakov Levy; Samuel S Cho; Tongye Shen; José N Onuchic; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-08       Impact factor: 11.205

3.  Direct single-molecule observation of a protein living in two opposed native structures.

Authors:  Yann Gambin; Alexander Schug; Edward A Lemke; Jason J Lavinder; Allan Chris M Ferreon; Thomas J Magliery; José N Onuchic; Ashok A Deniz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-08       Impact factor: 11.205

Review 4.  The loop hypothesis: contribution of early formed specific non-local interactions to the determination of protein folding pathways.

Authors:  Tomer Orevi; Gil Rahamim; Gershon Hazan; Dan Amir; Elisha Haas
Journal:  Biophys Rev       Date:  2013-04-12

Review 5.  Frustration in biomolecules.

Authors:  Diego U Ferreiro; Elizabeth A Komives; Peter G Wolynes
Journal:  Q Rev Biophys       Date:  2014-09-16       Impact factor: 5.318

Review 6.  Multicolor single-molecule FRET to explore protein folding and binding.

Authors:  Yann Gambin; Ashok A Deniz
Journal:  Mol Biosyst       Date:  2010-07-02

7.  Cysteine-free Rop: a four-helix bundle core mutant has wild-type stability and structure but dramatically different unfolding kinetics.

Authors:  Sanjay B Hari; Chang Byeon; Jason J Lavinder; Thomas J Magliery
Journal:  Protein Sci       Date:  2010-04       Impact factor: 6.725

8.  Mutations as trapdoors to two competing native conformations of the Rop-dimer.

Authors:  Alexander Schug; Paul C Whitford; Yaakov Levy; José N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-29       Impact factor: 11.205

9.  What have we learned from the studies of two-state folders, and what are the unanswered questions about two-state protein folding?

Authors:  Doug Barrick
Journal:  Phys Biol       Date:  2009-02-10       Impact factor: 2.583

  9 in total

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