Literature DB >> 21097705

Energetics and mechanisms of folding and flipping the myristoyl switch in the {beta}-trefoil protein, hisactophilin.

Martin T J Smith1, Joseph Meissner, Samantha Esmonde, Hannah J Wong, Elizabeth M Meiering.   

Abstract

Myristoylation, the covalent linkage of a saturated, C(14) fatty acyl chain to the N-terminal glycine in a protein, plays a vital role in reversible membrane binding and signaling by the modified proteins. Currently, little is known about the effects of myristoylation on protein folding and stability, or about the energetics and molecular mechanisms of switching involving states with sequestered versus accessible myristoyl group. Our analysis of these effects in hisactophilin, a histidine-rich protein that binds cell membranes and actin in a pH-dependent manner, shows that myristoylation significantly increases hisactophilin stability, while also markedly increasing global protein folding and unfolding rates. The switching between sequestered and accessible states is pH dependent, with an apparent pK(switch) of 6.95, and an apparent free energy change of 2.0 kcal·mol(-1). The myristoyl switch is linked to the reversible uptake of ∼1.5 protons, likely by histidine residues. This pH dependence of switching appears to be the physical basis of the sensitive, pH-dependent regulation of membrane binding observed in vivo. We conclude that an increase in protein stability upon modification and burial of the attached group is likely to occur in numerous proteins modified with fatty acyl or other hydrophobic groups, and that the biophysical effects of such modification are likely to play an important role in their functional switches. In addition, the increased global dynamics caused by myristoylation of hisactophilin reveals a general mechanism whereby hydrophobic moieties can make nonnative interactions or relieve strain in transition states, thereby increasing the rates of interconversion between different states.

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Year:  2010        PMID: 21097705      PMCID: PMC3000276          DOI: 10.1073/pnas.1008026107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  Unspecific hydrophobic stabilization of folding transition states.

Authors:  Ana Rosa Viguera; Cristina Vega; Luis Serrano
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

2.  Conformational strain in the hydrophobic core and its implications for protein folding and design.

Authors:  Salvador Ventura; Maria Cristina Vega; Emmanuel Lacroix; Isabelle Angrand; Laura Spagnolo; Luis Serrano
Journal:  Nat Struct Biol       Date:  2002-06

3.  A myristoyl switch regulates membrane binding of HIV-1 Gag.

Authors:  Marilyn D Resh
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-05       Impact factor: 11.205

4.  Total chemical synthesis of N-myristoylated HIV-1 matrix protein p17: structural and mechanistic implications of p17 myristoylation.

Authors:  Zhibin Wu; Jerry Alexandratos; Bryan Ericksen; Jacek Lubkowski; Robert C Gallo; Wuyuan Lu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-27       Impact factor: 11.205

Review 5.  Exploring folding free energy landscapes using computational protein design.

Authors:  Brian Kuhlman; David Baker
Journal:  Curr Opin Struct Biol       Date:  2004-02       Impact factor: 6.809

6.  Conserved and nonconserved features of the folding pathway of hisactophilin, a beta-trefoil protein.

Authors:  Chengsong Liu; Joe A Gaspar; Hannah J Wong; Elizabeth M Meiering
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

7.  Long-range effects on calcium binding and conformational change in the N-domain of calmodulin.

Authors:  A Ababou; R A Shenvi; J R Desjarlais
Journal:  Biochemistry       Date:  2001-10-23       Impact factor: 3.162

8.  Protein folding kinetics beyond the phi value: using multiple amino acid substitutions to investigate the structure of the SH3 domain folding transition state.

Authors:  Julian G B Northey; Karen L Maxwell; Alan R Davidson
Journal:  J Mol Biol       Date:  2002-07-05       Impact factor: 5.469

9.  Thermodynamics and kinetics of non-native interactions in protein folding: a single point mutant significantly stabilizes the N-terminal domain of L9 by modulating non-native interactions in the denatured state.

Authors:  Jae-Hyun Cho; Satoshi Sato; Daniel P Raleigh
Journal:  J Mol Biol       Date:  2004-05-07       Impact factor: 5.469

10.  Hisactophilin is involved in osmoprotection in Dictyostelium.

Authors:  Tanja Pintsch; Hans Zischka; Stephan C Schuster
Journal:  BMC Biochem       Date:  2002-05-07       Impact factor: 4.059

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  8 in total

1.  β-Bulge triggers route-switching on the functional landscape of interleukin-1β.

Authors:  Dominique T Capraro; Melinda Roy; José N Onuchic; Shachi Gosavi; Patricia A Jennings
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-17       Impact factor: 11.205

2.  Protein unfolding rates correlate as strongly as folding rates with native structure.

Authors:  Aron Broom; Shachi Gosavi; Elizabeth M Meiering
Journal:  Protein Sci       Date:  2014-12-26       Impact factor: 6.725

3.  Nonnative interactions regulate folding and switching of myristoylated protein.

Authors:  Dalit Shental-Bechor; Martin T J Smith; Duncan Mackenzie; Aron Broom; Amir Marcovitz; Fadila Ghashut; Chris Go; Fernando Bralha; Elizabeth M Meiering; Yaakov Levy
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-30       Impact factor: 11.205

4.  Protein Lipidation: Occurrence, Mechanisms, Biological Functions, and Enabling Technologies.

Authors:  Hong Jiang; Xiaoyu Zhang; Xiao Chen; Pornpun Aramsangtienchai; Zhen Tong; Hening Lin
Journal:  Chem Rev       Date:  2018-01-02       Impact factor: 60.622

5.  A fine balance of hydrophobic-electrostatic communication pathways in a pH-switching protein.

Authors:  Duncan W S MacKenzie; Anna Schaefer; Julia Steckner; Christopher A Leo; Dalia Naser; Efrosini Artikis; Aron Broom; Travis Ko; Purnank Shah; Mikaela Q Ney; Elisa Tran; Martin T J Smith; Brian Fuglestad; A Joshua Wand; Charles L Brooks; Elizabeth M Meiering
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-22       Impact factor: 12.779

Review 6.  Considering protonation as a posttranslational modification regulating protein structure and function.

Authors:  André Schönichen; Bradley A Webb; Matthew P Jacobson; Diane L Barber
Journal:  Annu Rev Biophys       Date:  2013-02-28       Impact factor: 12.981

7.  Understanding the folding-function tradeoff in proteins.

Authors:  Shachi Gosavi
Journal:  PLoS One       Date:  2013-04-12       Impact factor: 3.240

8.  Geometrical Frustration in Interleukin-33 Decouples the Dynamics of the Functional Element from the Folding Transition State Ensemble.

Authors:  Kaitlin M Fisher; Ellinor Haglund; Jeffrey K Noel; Kendra L Hailey; José N Onuchic; Patricia A Jennings
Journal:  PLoS One       Date:  2015-12-02       Impact factor: 3.240

  8 in total

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