Literature DB >> 9008364

A study of protein-water exchange through the off-resonance ROESY experiment: application to the DNA-binding domain of AlcR.

N Birlirakis1, R Cerdan, E Guittet.   

Abstract

In this communication a new NMR experiment for the safe observation and quantification of water-protein exchange phenomena is presented. It combines a water-selective pulse, offering chemical shift-based separation, and the off-resonance ROESY dynamic filter, which permits the elimination of the unwanted intramolecular dipolar cross relaxation of protein protons. Moreover, pulsed field gradients are used for the suppression of radiation damping and the solvent signal. The straightforward incorporation of this sequence in heteronuclear experiments is demonstrated for the case of the DNA-binding domain of the alcohol regulator protein.

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Year:  1996        PMID: 9008364     DOI: 10.1007/bf00228149

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  11 in total

1.  Correct intron splicing generates a new type of a putative zinc-binding domain in a transcriptional activator of Aspergillus nidulans.

Authors:  P Kulmburg; T Prangé; M Mathieu; D Sequeval; C Scazzocchio; B Felenbok
Journal:  FEBS Lett       Date:  1991-03-11       Impact factor: 4.124

2.  Suppression of radiation damping during selective excitation of the water signal: The WANTED sequence.

Authors:  A Böckmann; E Guittet
Journal:  J Biomol NMR       Date:  1996-07       Impact factor: 2.835

3.  Protein hydration in aqueous solution.

Authors:  G Otting; E Liepinsh; K Wüthrich
Journal:  Science       Date:  1991-11-15       Impact factor: 47.728

4.  Solution structure of a Lewis(x) analogue by off-resonance 1H NMR spectroscopy without use of an internal distance reference.

Authors:  P Berthault; N Birlirakis; G Rubinstenn; P Sinaÿ; H Desvaux
Journal:  J Biomol NMR       Date:  1996-07       Impact factor: 2.835

5.  Separation of intramolecular NOE and exchange peaks in water exchange spectroscopy using spin-echo filters.

Authors:  S Mori; J M Berg; P C van Zijl
Journal:  J Biomol NMR       Date:  1996-01       Impact factor: 2.835

6.  Selective excitation of intense solvent signals in the presence of radiation damping.

Authors:  G Otting; E Liepinsh
Journal:  J Biomol NMR       Date:  1995-06       Impact factor: 2.835

7.  Improved sensitivity of HSQC spectra of exchanging protons at short interscan delays using a new fast HSQC (FHSQC) detection scheme that avoids water saturation.

Authors:  S Mori; C Abeygunawardana; M O Johnson; P C van Zijl
Journal:  J Magn Reson B       Date:  1995-07

Review 8.  NMR spectroscopy of hydroxyl protons in aqueous solutions of peptides and proteins.

Authors:  E Liepinsh; G Otting; K Wüthrich
Journal:  J Biomol NMR       Date:  1992-09       Impact factor: 2.835

9.  Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions.

Authors:  M Piotto; V Saudek; V Sklenár
Journal:  J Biomol NMR       Date:  1992-11       Impact factor: 2.835

10.  Measurement of amide proton exchange rates and NOEs with water in 13C/15N-enriched calcineurin B.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1993-11       Impact factor: 2.835

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  4 in total

1.  Three-dimensional solution structure of beta cryptogein, a beta elicitin secreted by a phytopathogenic fungus Phytophthora cryptogea.

Authors:  S Fefeu; S Bouaziz; J C Huet; J C Pernollet; E Guittet
Journal:  Protein Sci       Date:  1997-11       Impact factor: 6.725

2.  Water-macromolecule interactions by NMR: a quadrature-free constant-time approach and its application to CI2.

Authors:  G Melacini; R Boelens; R Kaptein
Journal:  J Biomol NMR       Date:  1999-11       Impact factor: 2.835

3.  Half-filter experiments for assignment, structure determination and hydration analysis of unlabelled ligands bound to 13C/15N labelled proteins.

Authors:  C Dalvit; S Cottens; P Ramage; U Hommel
Journal:  J Biomol NMR       Date:  1999-01       Impact factor: 2.835

4.  Accurate quantitation of water-amide proton exchange rates using the phase-modulated CLEAN chemical EXchange (CLEANEX-PM) approach with a Fast-HSQC (FHSQC) detection scheme.

Authors:  T L Hwang; P C van Zijl; S Mori
Journal:  J Biomol NMR       Date:  1998-02       Impact factor: 2.835

  4 in total

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